Logo
Information on SUBCLASS 6.4.1
Subclass Accession number: 8641
Subclass: 6.4.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 28.8 +/- 29.2
Average RMSD (Å) : 0.725 +/- 0.377

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXchphpphp
(φψ)-conformation: aalppaaabb
Pattern: [fgv][alp][aepq][AIV][AKLV][afgpy][AFLM][ILVY][ekqs][fmtv][GLMT][akqs][AEST][AEKNS]x[DGNS][vy][AKS][ILP][AES][DNQ][ILV][dhq][GILV][ait][agi]
Conservation:-1.410-0.899-1.0301.656-0.476-1.6170.4050.954-0.104-0.798-0.808-0.7270.264-0.235-1.1041.1000.0660.8350.6000.8531.5022.239-0.0610.120-0.931-0.395
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bu8_A_1141bu8   A125150GAEIAFLVQVLSTEMGYSPENVHLIGHHHHHHHHHHHHHHH---GGGEEEEEaaaaaaaaaaaaaaavxpaaabbbbb
1eth_A_1151eth   A126151GAEVAYFVEVLKSSLGYSPSNVHVIGHHHHHHHHHHHHHHH---GGGEEEEEaaaaaaaaaaaaaaagxxaaaxbbbb
1f07_A_1751f07   A178203FEAAVPLIKEGAEAAGKSIADIDVAAHHHHHHHHHHHHHHTT--GGGSEEEEaaaaaaaaaaaaaaavbbaaabxxbx
1gpl_*_1141gpl   -125150GAEVAYLVQVLSTSLNYAPENVHIIGHHHHHHHHHHHHHHH---GGGEEEEEaaaaaaaaaaaaaaalxxaaabbbbb
1kz1_A_291kz1   A3358EPLVKGAVETMIEKHDVKLENIDIESHHHHHHHHHHHHHHH---GGGEEEEEaaaaaaaaaaaaaaavxxaaabxbbb
1lpb_B_1141lpb   B125150GAEVAYFVEFLQSAFGYSPSNVHVIGHHHHHHHHHHHHHHH---GGGEEEEEaaaaaaaaaaaaaaavxxaaaxbbbb
1req_A_1711req   A171196VLPILALYVVTAEEQGVKPEQLAGTIHHHHHHHHHHHHHHTT--GGG-EEEEaaaaaaaaaaaaaaavbxaaaxbebb
1rp1_*_1141rp1   -125150GAQVAQMLSMLSANYSYSPSQVQLIGHHHHHHHHHHHHHHH---GGGEEEEEaaaaaaaaaaaaaaalxxaaabbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eth_A_1151eth   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE Y - 115
1eth_A_1151eth   A     BMABETA-D-MANNOSE R - 123
1eth_A_1151eth   A     NAGN-ACETYL-D-GLUCOSAMINE A - 130
1eth_A_1151eth   A     NAGN-ACETYL-D-GLUCOSAMINE V - 133
1eth_A_1151eth   A     NAGN-ACETYL-D-GLUCOSAMINE E - 134
1eth_A_1151eth   A     NAGN-ACETYL-D-GLUCOSAMINE K - 137
1eth_A_1151eth   A     NAGN-ACETYL-D-GLUCOSAMINE P - 144
1eth_A_1151eth   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE H - 152
1f07_A_1751f07   A     MPD2-METHYL-2,4-PENTANEDIOL D - 177
1f07_A_1751f07   A     MPD2-METHYL-2,4-PENTANEDIOL A - 180
1f07_A_1751f07   A     MPD2-METHYL-2,4-PENTANEDIOL A - 181
1f07_A_1751f07   A     MPD2-METHYL-2,4-PENTANEDIOL L - 184
1f07_A_1751f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID Y - 204
1f07_A_1751f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID T - 205
1f07_A_1751f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID C - 206
1f07_A_1751f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID C - 207
1lpb_B_1141lpb   B     MUPMETHOXYUNDECYLPHOSPHINIC ACID Y - 114
1lpb_B_1141lpb   B     MUPMETHOXYUNDECYLPHOSPHINIC ACID H - 151
1req_A_1711req   A     DCADESULFO-COENZYME A G - 194
1req_A_1711req   A     DCADESULFO-COENZYME A T - 195

Clusters included in this Subclass
CLUSTER: HE.7.15