Information on SUBCLASS 6.17.1 |
Subclass Accession number: 8661
Subclass: 6.17.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 14.6 +/- 16.0 Average RMSD (Å) : 1.300 +/- 0.292 Consensus geometry
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Consensus Sequence: | XXGhXhXXXX |
(φψ)-conformation: | aalbppppbb |
Pattern: | [ACFL] | [altv] | [DKS] | [ael] | [lty] | [GM] | [AL] | x | [apvy] | [depr] | x | [atv] | x |
Conservation: | 0.009 | -0.703 | 1.068 | -0.708 | -0.486 | 2.486 | 1.077 | 0.049 | -0.750 | -0.797 | -0.985 | 0.070 | -0.331 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ga6_A_39 | 1ga6 | A | 48 | 60 | FTSANGLASVNTQ | HHHHTT-----EE | aaaaavxpxxxbb |
1jm6_A_1189 | 1jm6 | A | 1204 | 1216 | CDKYYMASPDLEI | HHHHHS----EEE | aaaaavbbxxbbb |
1mdl_*_123 | 1mdl | - | 123 | 135 | LVKLLGANARPVQ | HHHHTT-----EE | aaaaavbxxbxbp |
1nyr_A_437 | 1nyr | A | 450 | 462 | AADELGLSYEEAI | HHHHH------EE | aaaaavbxbbxbb |
1xim_A_65 | 1xim | A | 78 | 90 | ALDETGLIVPMVT | HHHHHT-B--EEE | aaaaavxbbwbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ga6_A_39 | 1ga6 | A | GOLGLYCEROL | Q - 47 |
1ga6_A_39 | 1ga6 | A | GOLGLYCEROL | F - 48 |
1ga6_A_39 | 1ga6 | A | GOLGLYCEROL | A - 51 |
1ga6_A_39 | 1ga6 | A | GOLGLYCEROL | N - 52 |
1mdl_*_123 | 1mdl | * | SMN(S)-MANDELIC ACID | Y - 137 |
1mdl_*_123 | 1mdl | * | SMN(S)-MANDELIC ACID | S - 139 |
1xim_A_65 | 1xim | A | XYLD-XYLITOL | T - 90 |
Clusters included in this Subclass |
CLUSTER: HE.6.141 |
CLUSTER: HE.7.108 |