ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 7.13.1

Subclass Accession number: 8699
Subclass: 7.13.1

Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 4

Average sequence ID (%) : 60.7 +/- 14.9
Average RMSD (Å) : 0.300 +/- 0.082

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	pXXXVpREDhF
(φψ)-conformation:	aalabbaaabb

Pattern:	[E]	[EN]	[EQ]	[V]	[G]	x	[AG]	[IL]	[QR]	[ES]	[K]	[IL]	[AEKQ]	[DEG]	[GKQ]	[ASTV]	[V]	[KQ]	[R]	[E]	[D]	[IL]	[F]	[IY]	[TV]	[S]	[K]	[L]
Conservation:	1.013	-0.390	0.126	0.375	1.652	-1.765	-0.646	-0.230	-0.257	-0.711	1.013	-0.230	-1.342	-1.071	-1.489	-1.501	0.375	-0.190	1.013	1.013	1.652	-0.260	1.652	-0.803	-0.759	0.375	1.013	0.375

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1afs_A_58	1afs	A	58	85	EEEVGQAIRSKIEDGTVKREDIFYTSKL	HHHHHHHHHHHHHTTS--GGG-EEEEEE	aaaaaaaaaaaaaavabbaaaxbbbbbx
1ah4_*_51	1ah4	-	51	78	ENEVGLGLQEKLQGQVVKREDLFIVSKL	HHHHHHHHHHHHHTTSS-GGG-EEEEEE	aaaaaaaaaaaaaalabbaaabbbbbbx
1frb_*_51	1frb	-	51	78	ENEVGEAIQEKIKEKAVQREDLFIVSKL	HHHHHHHHHHHHHTTS--GGG-EEEEEE	aaaaaaaaaaaaaavabbaaabbxbbbx
1j96_A_58	1j96	A	58	85	EEQVGLAIRSKIADGSVKREDIFYTSKL	HHHHHHHHHHHHHTTS--GGG-EEEEEE	aaaaaaaaaaaaaavabxaaabbbbbbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1afs_A_58	1afs	A	NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	K - 84
1afs_A_58	1afs	A	TESTESTOSTERONE	K - 84
1ah4_*_51	1ah4	*	NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	K - 77
1frb_*_51	1frb	*	ZST3,4-DIHYDRO-4-OXO-3-((5-TRIFLUOROMETHYL-2-BENZOTHIAZOLYL)METHYL)-1-PHTHALAZINE ACETIC ACID	K - 77
1j96_A_58	1j96	A	ACTACETATE ION	K - 84

Clusters included in this Subclass