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Information on SUBCLASS 0.1.27
Subclass Accession number: 885
Subclass: 0.1.27 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 9.2 +/- 11.1
Average RMSD (Å) : 0.583 +/- 0.172

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: hpXX
(φψ)-conformation: bbaa
Pattern: [aekrs][ADPV][FITV][ADKT]x[cde][dhkq][afily]
Conservation:-0.281-0.4681.3121.130-1.6300.729-0.076-0.715
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bx4_A_161bx4   A2128AVVDKDFLEE--HHHHbxbbaaaa
1cr5_A_961cr5   A100107KAFDLFKYEE--HHHHbpbbaaaa
1dqs_A_3801dqs   A380387SVVANEDIEE--HHHHbxbxaaaa
1fts_*_4801fts   -481488RPFKADDFEE--HHHHxxxbaaaa
1g8k_A_1311g8k   A132139VDTTWDHAEE--HHHHbxbxaaaa
1uzp_A_16041uzp   A16051612EDIDECQEEE--HHHHbxxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bx4_A_161bx4   A     ADNADENOSINE L - 16
1bx4_A_161bx4   A     ADNADENOSINE L - 17
1bx4_A_161bx4   A     ADNADENOSINE D - 18
1bx4_A_161bx4   A     MO4MAGNESIUM ION, 4 WATERS COORDINATED L - 28
1bx4_A_161bx4   A     MO4MAGNESIUM ION, 4 WATERS COORDINATED D - 29
1bx4_A_161bx4   A     MO4MAGNESIUM ION, 4 WATERS COORDINATED K - 30
1g8k_A_1311g8k   A     OC2CALCIUM ION, 2 WATERS COORDINATED V - 132
1uzp_A_16041uzp   A     SMSAMARIUM (III) ION D - 1606
1uzp_A_16041uzp   A     SMSAMARIUM (III) ION I - 1607
1uzp_A_16041uzp   A     SMSAMARIUM (III) ION D - 1608
1uzp_A_16041uzp   A     SMSAMARIUM (III) ION E - 1609
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1uzp_A_16041uzp   A AC2SM BINDING SITE FOR CHAIN AD - 1606
1uzp_A_16041uzp   A AC2SM BINDING SITE FOR CHAIN AI - 1607
1uzp_A_16041uzp   A AC2SM BINDING SITE FOR CHAIN AE - 1609

Clusters included in this Subclass
CLUSTER: EH.1.64