Information on SUBCLASS 0.1.27 |
Subclass Accession number: 885
Subclass: 0.1.27 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 9.2 +/- 11.1 Average RMSD (Å) : 0.583 +/- 0.172 Consensus geometry
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Consensus Sequence: | hpXX |
(φψ)-conformation: | bbaa |
Pattern: | [aekrs] | [ADPV] | [FITV] | [ADKT] | x | [cde] | [dhkq] | [afily] |
Conservation: | -0.281 | -0.468 | 1.312 | 1.130 | -1.630 | 0.729 | -0.076 | -0.715 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bx4_A_16 | 1bx4 | A | 21 | 28 | AVVDKDFL | EE--HHHH | bxbbaaaa |
1cr5_A_96 | 1cr5 | A | 100 | 107 | KAFDLFKY | EE--HHHH | bpbbaaaa |
1dqs_A_380 | 1dqs | A | 380 | 387 | SVVANEDI | EE--HHHH | bxbxaaaa |
1fts_*_480 | 1fts | - | 481 | 488 | RPFKADDF | EE--HHHH | xxxbaaaa |
1g8k_A_131 | 1g8k | A | 132 | 139 | VDTTWDHA | EE--HHHH | bxbxaaaa |
1uzp_A_1604 | 1uzp | A | 1605 | 1612 | EDIDECQE | EE--HHHH | bxxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bx4_A_16 | 1bx4 | A | ADNADENOSINE | L - 16 |
1bx4_A_16 | 1bx4 | A | ADNADENOSINE | L - 17 |
1bx4_A_16 | 1bx4 | A | ADNADENOSINE | D - 18 |
1bx4_A_16 | 1bx4 | A | MO4MAGNESIUM ION, 4 WATERS COORDINATED | L - 28 |
1bx4_A_16 | 1bx4 | A | MO4MAGNESIUM ION, 4 WATERS COORDINATED | D - 29 |
1bx4_A_16 | 1bx4 | A | MO4MAGNESIUM ION, 4 WATERS COORDINATED | K - 30 |
1g8k_A_131 | 1g8k | A | OC2CALCIUM ION, 2 WATERS COORDINATED | V - 132 |
1uzp_A_1604 | 1uzp | A | SMSAMARIUM (III) ION | D - 1606 |
1uzp_A_1604 | 1uzp | A | SMSAMARIUM (III) ION | I - 1607 |
1uzp_A_1604 | 1uzp | A | SMSAMARIUM (III) ION | D - 1608 |
1uzp_A_1604 | 1uzp | A | SMSAMARIUM (III) ION | E - 1609 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1uzp_A_1604 | 1uzp | A | AC2SM BINDING SITE FOR CHAIN A | D - 1606 |
1uzp_A_1604 | 1uzp | A | AC2SM BINDING SITE FOR CHAIN A | I - 1607 |
1uzp_A_1604 | 1uzp | A | AC2SM BINDING SITE FOR CHAIN A | E - 1609 |
Clusters included in this Subclass |
CLUSTER: EH.1.64 |