Information on SUBCLASS 1.4.5 |
Subclass Accession number: 8873
Subclass: 1.4.5 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 66.7 +/- 0.0 Average RMSD (Å) : 0.100 +/- 0.000 Consensus geometry
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Consensus Sequence: | TFGDY |
(φψ)-conformation: | aaeaa |
Pattern: | [F] | [NT] | [E] | [T] | [F] | [G] | [D] | [Y] | [AS] | [EP] | [KQ] | [A] | [HR] | [DE] | [L] | [L] | [N] | [T] |
Conservation: | 1.025 | -1.259 | 0.322 | 0.322 | 1.025 | 1.025 | 1.025 | 1.728 | -1.435 | -1.435 | -1.084 | -0.381 | -0.908 | -0.556 | -0.381 | -0.381 | 1.025 | 0.322 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cf3_A_354 | 1cf3 | A | 354 | 371 | FNETFGDYSEKAHELLNT | HHHHHGGGHHHHHHHHHH | aaaaaeaaaaaaaaaaaa |
1gpe_A_358 | 1gpe | A | 358 | 375 | FTETFGDYAPQARDLLNT | HHHHHGGGHHHHHHHHHH | aaaaaeaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cf3_A_354 | 1cf3 | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 355 |
1cf3_A_354 | 1cf3 | A | NAGN-ACETYL-D-GLUCOSAMINE | S - 362 |
1cf3_A_354 | 1cf3 | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 363 |
1cf3_A_354 | 1cf3 | A | NAGN-ACETYL-D-GLUCOSAMINE | H - 366 |
1gpe_A_358 | 1gpe | A | NAGN-ACETYL-D-GLUCOSAMINE | F - 358 |
1gpe_A_358 | 1gpe | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 359 |
1gpe_A_358 | 1gpe | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 360 |
1gpe_A_358 | 1gpe | A | NAGN-ACETYL-D-GLUCOSAMINE | R - 370 |
Clusters included in this Subclass |
CLUSTER: HH.3.124 |