ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 2.2.12

Subclass Accession number: 8928
Subclass: 2.2.12

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 15.4 +/- 15.0
Average RMSD (Å) : 1.000 +/- 0.100

Consensus geometry

d (Å): 9

delta (°): 90-135

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	XpXDXp
(φψ)-conformation:	aalpaa

Pattern:	[EPS]	x	[AV]	[KRT]	[ET]	x	[AQ]	[AS]	x	[AFV]	[GLV]	[ENY]	[AEK]	[ILW]	[AL]	[GKR]	[HR]	[EG]	[D]	x	[ENR]	[EGT]	[AL]	x	[AGR]	[AFI]
Conservation:	-0.206	-1.333	0.518	0.076	0.567	-0.488	0.497	0.886	0.114	-0.582	-1.145	-0.394	-0.206	-0.112	0.110	-0.206	1.294	0.530	3.741	-0.957	0.170	-0.770	0.110	-1.145	-0.488	-0.582

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ni9_A_6	1ni9	A	10	35	SRVTESAALAGYKWLGRGDKNTADGA	HHHHHHHHHHHHHHHHTT-HHHHHHH	aaaaaaaaaaaaaaaaavxaaaaaaa
1qht_A_617	1qht	A	617	642	EIAKETQARVLEAILKHGDVEEAVRI	HHHHHHHHHHHHHHHHH--HHHHHHH	aaaaaaaaaaaaaaaaalbaaaaaaa
1qsa_A_69	1qsa	A	69	94	PPARTLQSRFVNELARREDWRGLLAF	HHHHHHHHHHHHHHHHTT-HHHHHHH	aaaaaaaaaaaaaaaaavxaaaaaaa

Clusters included in this Subclass