Information on SUBCLASS 9.4.1 |
Subclass Accession number: 9198
Subclass: 9.4.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 40.9 +/- 21.6 Average RMSD (Å) : 0.300 +/- 0.000 Consensus geometry
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Consensus Sequence: | hhGGpGYXpphPh |
(φψ)-conformation: | aaeaaaapaabaa |
Pattern: | [AT] | x | [DEY] | [ACS] | [AS] | [GIM] | [AV] | [IK] | x | [AFVY] | [AS] | [AGS] | [DE] | [ACIV] | [A] | x | [AQR] | [ILV] | [AST] | x | [DEQ] | [AG] | [IV] | [Q] | [CI] | [FL] | [G] | [G] | x | [G] | [FY] | x | [ENT] | [DE] | [FMY] | [P] | [AMV] | [AEG] | [KR] | [FHLY] | [LMY] | [R] | [D] | [A] |
Conservation: | -0.034 | -1.143 | -0.636 | -0.478 | -0.010 | -1.315 | -0.285 | -0.793 | -1.204 | -1.011 | -0.031 | -0.519 | 0.574 | -0.798 | 0.728 | -0.807 | -0.645 | -0.002 | -0.464 | -1.166 | 0.045 | -0.157 | 0.445 | 1.296 | -0.218 | -0.106 | 1.864 | 1.864 | -0.966 | 1.864 | 1.391 | -1.330 | -0.641 | 0.600 | -0.033 | 2.432 | -0.666 | -0.966 | 0.558 | -0.656 | -0.470 | 1.296 | 1.864 | 0.728 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1buc_A_317 | 1buc | A | 317 | 360 | TVDAAIAKRVASDVAMRVTTEAVQIFGGYGYSEEYPVARHMRDA | HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaaaaaaeaaaaxaaxaaaaaaaaa |
1egd_A_326 | 1egd | A | 326 | 369 | TYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDA | HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTSTTSSHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaaaaaaeaaaaxaabaaaaaaaaa |
1ivh_A_325 | 1ivh | A | 325 | 368 | AKDCAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDA | HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSTHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaaaaaaeaaaabaabaaaaaaaaa |
1jqi_A_318 | 1jqi | A | 318 | 361 | TKESAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERYYRDA | HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTSTTSSHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaaaaaaeaaaabaabaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.9.19 |