ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 17.2.1

Subclass Accession number: 9258
Subclass: 17.2.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 31.7 +/- 16.7
Average RMSD (Å) : 0.733 +/- 0.153

Consensus geometry

d (Å): 17

delta (°): 45-90

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	pLGhhXXphPXphXGXGLcph
(φψ)-conformation:	aalaaaaappaaalpalbbaa

Pattern:	x	[EPS]	x	[IVW]	[KR]	[KQR]	[ALM]	[GW]	[EN]	[L]	[G]	[LV]	[LM]	[AGN]	[IMT]	[DHT]	[AIV]	[P]	x	[ENQ]	[CLY]	[GS]	[G]	x	[G]	[L]	[DG]	[TY]	[FL]	[ADE]	x	[CSV]	[IL]	[AIV]	x	[E]	[E]	[IL]	[AS]	[RY]	[AG]
Conservation:	-1.246	-0.831	-1.316	-0.761	0.575	-0.069	-0.761	0.179	0.093	0.832	2.079	-0.035	0.334	-0.831	-0.831	-0.900	-0.554	2.702	-0.651	-0.276	-0.831	0.189	2.079	-1.108	2.079	0.832	0.064	-0.119	-0.163	-0.761	-0.623	-1.038	0.256	-0.554	-0.900	1.455	1.455	0.245	-0.049	-0.420	0.179

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1egd_A_50	1egd	A	50	90	VPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYG	HHHHHHHHHHT-SSTTS-GGGTS----HHHHHHHHHHHHHH	aaaaaaaaaavaaaaapwaaavxalxxaaaaaaaaaaaaaa
1ivh_A_48	1ivh	A	49	89	REFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA	HHHHHHHHHHT-TTTTS-GGGT-----HHHHHHHHHHHHHH	aaaaaaaaaavaaaaaxpaaavxavbbaaaaaaaaaaaaaa
1jqi_A_44	1jqi	A	44	84	TSQVKKMGELGLLAMDVPEELSGAGLDYLAYSIALEEISRG	HHHHHHHHHHTTTSSSS-GGGT-----HHHHHHHHHHHHHH	aaaaaaaaaavaaaaaxxaaavxavbbaaaaaaaaaaaaaa

Clusters included in this Subclass