PDB: 1euz Compound: glutamate dehydrogenase Classification: OXIDOREDUCTASE Entry date in PDB: 2001-04-25 Resolution [Å]: 2.25 R-Factor: 0.187

CHAIN: A SWISS-PROT/TREMBL: O74024    KEYWORD: 3D-structure    NAD    NADP    Oxidoreductase    EC: 1.4.1.3 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Archaeon Thermococcus profundus SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Archaeon Thermococcus profundus GO:  oxidoreductase activity    amino acid metabolism    CHAIN: B SWISS-PROT/TREMBL: O74024    KEYWORD: 3D-structure    NAD    NADP    Oxidoreductase    EC: 1.4.1.3 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Archaeon Thermococcus profundus SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Archaeon Thermococcus profundus GO:  oxidoreductase activity    amino acid metabolism    CHAIN: C SWISS-PROT/TREMBL: O74024    KEYWORD: 3D-structure    NAD    NADP    Oxidoreductase    EC: 1.4.1.3 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Archaeon Thermococcus profundus SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Archaeon Thermococcus profundus GO:  oxidoreductase activity    amino acid metabolism    CHAIN: D SWISS-PROT/TREMBL: O74024    KEYWORD: 3D-structure    NAD    NADP    Oxidoreductase    EC: 1.4.1.3 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Archaeon Thermococcus profundus SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Archaeon Thermococcus profundus GO:  oxidoreductase activity    amino acid metabolism    CHAIN: E SWISS-PROT/TREMBL: O74024    KEYWORD: 3D-structure    NAD    NADP    Oxidoreductase    EC: 1.4.1.3 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Archaeon Thermococcus profundus SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Archaeon Thermococcus profundus GO:  oxidoreductase activity    amino acid metabolism    CHAIN: F SWISS-PROT/TREMBL: O74024    KEYWORD: 3D-structure    NAD    NADP    Oxidoreductase    EC: 1.4.1.3 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Archaeon Thermococcus profundus SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Archaeon Thermococcus profundus GO:  oxidoreductase activity    amino acid metabolism

Image Source: PDB

Loops in ArchDB95 clusters

1euz_A_68 - EH => SUBCLASS : 5.1.1
1euz_A_102 - EH => SUBCLASS : 5.8.3
1euz_A_140 - EH => SUBCLASS : 6.74.1
1euz_A_366 - HH => SUBCLASS : 3.1.1
1euz_A_5 - HH => SUBCLASS : 4.11.3
1euz_A_346 - HH => SUBCLASS : 5.1.1
1euz_A_150 - HH => SUBCLASS : 22.1.1
1euz_A_222 - HE => SUBCLASS : 1.1.1
1euz_A_222 - HE => SUBCLASS : 1.2.3
1euz_A_222 - HE => SUBCLASS : 2.1.5
1euz_A_80 - HE => SUBCLASS : 3.1.2
1euz_A_25 - HE => SUBCLASS : 3.25.1
1euz_A_190 - HE => SUBCLASS : 7.13.1
1euz_A_257 - HE => SUBCLASS : 8.16.1
1euz_A_238 - HA => SUBCLASS : 2.2.1

Loops in ArchDB-EC clusters

1euz_A_346 - HH => SUBCLASS : 5.1.1

Loops not clustered in ArchDB

1euz_A_51 - AR
1euz_A_51 - AR
1euz_A_214 - EH
1euz_A_336 - EH
1euz_A_313 - EH
1euz_A_277 - EH
1euz_A_248 - EH
1euz_A_36 - HA
1euz_A_291 - HA
1euz_A_238 - HA
1euz_A_36 - HA
1euz_A_291 - HA
1euz_A_324 - HE
1euz_A_281 - HE
1euz_A_117 - HE
1euz_A_340 - HH

1bvu A - percentage of sequence identity: 82
1bvu B - percentage of sequence identity: 82
1bvu C - percentage of sequence identity: 82
1bvu D - percentage of sequence identity: 82
1bvu E - percentage of sequence identity: 82
1bvu F - percentage of sequence identity: 82
1euz A - percentage of sequence identity: 100
1euz B - percentage of sequence identity: 100
1euz C - percentage of sequence identity: 100
1euz D - percentage of sequence identity: 100
1euz E - percentage of sequence identity: 100
1euz F - percentage of sequence identity: 100
1gtm A - percentage of sequence identity: 84
1gtm B - percentage of sequence identity: 84
1gtm C - percentage of sequence identity: 84