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Information on 1j34
PDB: 1j34
Compound: coagulation factor ix-binding protein a chain
Classification: PROTEIN BINDING/BLOOD CLOTTING
Entry date in PDB: 2003-07-08
Resolution [Å]: 1.55
R-Factor: 0.183


CHAIN: A
SWISS-PROT/TREMBL: P23806
   KEYWORD: 3D-structure    Calcium    Lectin    Signal   
SCOP: d.169.1.1 Alpha and beta proteins (a+b)    C-type lectin-like    C-type lectin-like    C-type lectin domain    Snake coagglutinin alpha chain    Habu snake (Trimeresurus flavoviridis)
GO:  sugar binding   


CHAIN: B
SWISS-PROT/TREMBL: P23807
   KEYWORD: 3D-structure    Calcium    Lectin    Signal   
SCOP: d.169.1.1 Alpha and beta proteins (a+b)    C-type lectin-like    C-type lectin-like    C-type lectin domain    Snake coagglutinin beta chain    Habu snake (Trimeresurus flavoviridis)
GO:  sugar binding   


CHAIN: C
SWISS-PROT/TREMBL: P00741
   KEYWORD: 3D-structure    Blood coagulation    Calcium-binding    EGF-like domain    Gamma-carboxyglutamic acid    Glycoprotein    Hemophilia    Hydrolase    Hydroxylation    Plasma    Serine protease    Vitamin K    Zymogen   
EC: 3.4.21.22
SCOP: g.32.1.1 Small proteins    GLA-domain    GLA-domain    GLA-domain    Coagulation factor IX (IXa)    Human (Homo sapiens)
GO:  extracellular region    calcium ion binding    chymotrypsin activity    trypsin activity    proteolysis and peptidolysis   
1j34 Image
Image Source: PDB

Stored Loops of 1j34

Loops in ArchDB40 clusters

1j34_A_7 - HA => SUBCLASS : 2.4.2
1j34_A_102 - HA => SUBCLASS : 6.15.1
1j34_A_38 - EH => SUBCLASS : 5.10.1
1j34_A_115 - AR => SUBCLASS : 5.4.1

Loops in ArchDB95 clusters

1j34_B_212 - EH => SUBCLASS : 1.1.26
1j34_A_12 - EH => SUBCLASS : 1.1.26
1j34_B_238 - EH => SUBCLASS : 5.7.1
1j34_A_38 - EH => SUBCLASS : 5.7.1
1j34_B_307 - AR => SUBCLASS : 2.2.1
1j34_A_115 - AR => SUBCLASS : 5.4.1
1j34_B_245 - HE => SUBCLASS : 2.8.5
1j34_B_223 - HE => SUBCLASS : 4.9.1
1j34_A_23 - HE => SUBCLASS : 4.9.1
1j34_A_7 - HA => SUBCLASS : 2.5.1
1j34_A_102 - HA => SUBCLASS : 6.11.1

Loops not clustered in ArchDB

1j34_A_66 - HA
1j34_B_207 - HA
1j34_B_263 - HA
1j34_B_295 - HA
1j34_A_45 - HE

Homologous structures to 1j34 classified in ArchDB

1bj3 A - percentage of sequence identity: 100
1dan L - percentage of sequence identity: 65
1fvu C - percentage of sequence identity: 66
1ijk B - percentage of sequence identity: 66
1ixx C - percentage of sequence identity: 85
1ixx E - percentage of sequence identity: 85
1j35 A - percentage of sequence identity: 100
1u0n B - percentage of sequence identity: 66
1u0o A - percentage of sequence identity: 66
1x2t A - percentage of sequence identity: 100
1x2t C - percentage of sequence identity: 100
1x2w A - percentage of sequence identity: 100