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Information on 1l0l
PDB: 1l0l
Compound: ubiquinol-cytochrome c reductase complex core prot
Classification: OXIDOREDUCTASE
Entry date in PDB: 2003-04-08
Resolution [Å]: 2.35
R-Factor: 0.260


CHAIN: A
SWISS-PROT/TREMBL: P31800
   KEYWORD: 3D-structure    Electron transport    Inner membrane    Mitochondrion    Oxidoreductase    Respiratory chain    Transit peptide   
EC: 1.10.2.2
SCOP: d.185.1.1 Alpha and beta proteins (a+b)    LuxS/MPP-like metallohydrolase    LuxS/MPP-like metallohydrolase    MPP-like    Cytochrome bc1 core subunit 1    Cow (Bos taurus)
SCOP: d.185.1.1 Alpha and beta proteins (a+b)    LuxS/MPP-like metallohydrolase    LuxS/MPP-like metallohydrolase    MPP-like    Cytochrome bc1 core subunit 1    Cow (Bos taurus)
GO:  


CHAIN: B
SWISS-PROT/TREMBL: P23004
   KEYWORD: 3D-structure    Electron transport    Inner membrane    Mitochondrion    Oxidoreductase    Respiratory chain    Transit peptide   
EC: 1.10.2.2
SCOP: d.185.1.1 Alpha and beta proteins (a+b)    LuxS/MPP-like metallohydrolase    LuxS/MPP-like metallohydrolase    MPP-like    Cytochrome bc1 core subunit 2    Cow (Bos taurus)
SCOP: d.185.1.1 Alpha and beta proteins (a+b)    LuxS/MPP-like metallohydrolase    LuxS/MPP-like metallohydrolase    MPP-like    Cytochrome bc1 core subunit 2    Cow (Bos taurus)
GO:  metalloendopeptidase activity    proteolysis and peptidolysis   


CHAIN: C


CHAIN: D


CHAIN: E


CHAIN: F


CHAIN: G


CHAIN: H


CHAIN: I
SWISS-PROT/TREMBL: P13272
   KEYWORD: 2Fe-2S    3D-structure    Electron transport    Inner membrane    Iron    Iron-sulfur    Metal-binding    Mitochondrion    Oxidoreductase    Respiratory chain    Transit peptide    Transmembrane   
EC: 1.10.2.2
SCOP: d.184.1.3 Alpha and beta proteins (a+b)    Non-globular alpha+beta subunits of globular proteins    Non-globular alpha+beta subunits of globular proteins    Ubiquinol-cytochrome c reductase 8 kDa protein    Ubiquinol-cytochrome c reductase 8 kDa protein    Cow (Bos taurus)
GO:  membrane    ubiquinol-cytochrome-c reductase complex    ubiquinol-cytochrome-c reductase complex (sensu Eukaryota)    oxidoreductase activity    ubiquinol-cytochrome-c reductase activity    electron transport   


CHAIN: J


CHAIN: K
1l0l Image
Image Source: PDB

Stored Loops of 1l0l

Loops in ArchDB40 clusters

1l0l_A_74 - HE => SUBCLASS : 1.1.1
1l0l_B_82 - HE => SUBCLASS : 1.1.1
1l0l_B_407 - HE => SUBCLASS : 1.2.9
1l0l_B_82 - HE => SUBCLASS : 2.1.2
1l0l_A_4 - HE => SUBCLASS : 4.44.1
1l0l_A_179 - HE => SUBCLASS : 5.14.2
1l0l_B_188 - HE => SUBCLASS : 5.14.2
1l0l_B_95 - HA => SUBCLASS : 2.2.1
1l0l_A_85 - HA => SUBCLASS : 2.2.1
1l0l_B_25 - HA => SUBCLASS : 3.1.1
1l0l_A_15 - HA => SUBCLASS : 3.1.1
1l0l_E_87 - HA => SUBCLASS : 3.26.1
1l0l_B_105 - EH => SUBCLASS : 1.3.1
1l0l_A_95 - EH => SUBCLASS : 1.3.1
1l0l_B_204 - EH => SUBCLASS : 3.4.1
1l0l_B_252 - EH => SUBCLASS : 4.21.1
1l0l_B_204 - EH => SUBCLASS : 5.5.2
1l0l_A_421 - EH => SUBCLASS : 7.29.1
1l0l_A_240 - AR => SUBCLASS : 4.9.1
1l0l_B_34 - AR => SUBCLASS : 5.42.1
1l0l_H_16 - HH => SUBCLASS : 1.1.1
1l0l_B_354 - HH => SUBCLASS : 1.1.3
1l0l_A_124 - HH => SUBCLASS : 1.1.4
1l0l_B_354 - HH => SUBCLASS : 1.1.4
1l0l_B_134 - HH => SUBCLASS : 1.1.10
1l0l_B_375 - HH => SUBCLASS : 5.6.1

Loops in ArchDB95 clusters

1l0l_B_105 - EH => SUBCLASS : 1.2.3
1l0l_A_95 - EH => SUBCLASS : 1.2.3
1l0l_A_95 - EH => SUBCLASS : 1.2.4
1l0l_E_95 - EH => SUBCLASS : 3.1.5
1l0l_E_95 - EH => SUBCLASS : 3.7.10
1l0l_B_252 - EH => SUBCLASS : 4.21.2
1l0l_B_204 - EH => SUBCLASS : 5.9.1
1l0l_A_421 - EH => SUBCLASS : 7.8.1
1l0l_A_240 - AR => SUBCLASS : 4.7.1
1l0l_A_240 - AR => SUBCLASS : 4.7.2
1l0l_B_34 - AR => SUBCLASS : 5.41.1
1l0l_H_16 - HH => SUBCLASS : 1.1.2
1l0l_B_354 - HH => SUBCLASS : 1.1.4
1l0l_A_124 - HH => SUBCLASS : 1.1.4
1l0l_B_134 - HH => SUBCLASS : 1.1.11
1l0l_B_134 - HH => SUBCLASS : 1.1.12
1l0l_B_395 - HH => SUBCLASS : 2.1.1
1l0l_A_171 - HH => SUBCLASS : 2.1.1
1l0l_K_8 - HH => SUBCLASS : 2.2.3
1l0l_B_375 - HH => SUBCLASS : 5.10.1
1l0l_B_407 - HE => SUBCLASS : 0.1.1
1l0l_A_74 - HE => SUBCLASS : 1.1.1
1l0l_B_407 - HE => SUBCLASS : 1.3.2
1l0l_B_82 - HE => SUBCLASS : 2.1.3
1l0l_B_82 - HE => SUBCLASS : 2.1.4
1l0l_B_82 - HE => SUBCLASS : 2.5.1
1l0l_A_4 - HE => SUBCLASS : 4.71.1
1l0l_B_188 - HE => SUBCLASS : 5.21.1
1l0l_A_179 - HE => SUBCLASS : 5.21.1
1l0l_A_85 - HA => SUBCLASS : 2.2.1
1l0l_B_95 - HA => SUBCLASS : 2.2.1
1l0l_B_25 - HA => SUBCLASS : 3.1.1
1l0l_A_15 - HA => SUBCLASS : 3.1.1
1l0l_A_85 - HA => SUBCLASS : 3.9.1
1l0l_E_87 - HA => SUBCLASS : 3.22.1

Loops in ArchDB-EC clusters

1l0l_B_375 - HH => SUBCLASS : 5.4.2

Loops not clustered in ArchDB

1l0l_E_163 - AR
1l0l_A_240 - AR
1l0l_E_76 - AR
1l0l_A_24 - AR
1l0l_A_24 - AR
1l0l_B_242 - AR
1l0l_B_34 - AR
1l0l_B_242 - AR
1l0l_A_34 - EH
1l0l_B_320 - EH
1l0l_B_44 - EH
1l0l_A_317 - EH
1l0l_A_279 - EH
1l0l_A_251 - EH
1l0l_A_195 - EH
1l0l_B_307 - HA
1l0l_A_306 - HA
1l0l_E_157 - HA
1l0l_A_15 - HA
1l0l_A_85 - HA
1l0l_A_306 - HA
1l0l_B_25 - HA
1l0l_B_95 - HA
1l0l_B_307 - HA
1l0l_E_26 - HE
1l0l_E_123 - HE
1l0l_B_294 - HE
1l0l_B_213 - HE
1l0l_A_404 - HE
1l0l_A_293 - HE
1l0l_A_266 - HE
1l0l_A_205 - HE
1l0l_F_41 - HH
1l0l_A_55 - HH
1l0l_A_106 - HH
1l0l_E_103 - HH
1l0l_A_145 - HH
1l0l_A_331 - HH
1l0l_A_351 - HH
1l0l_F_8 - HH
1l0l_B_267 - HH
1l0l_F_52 - HH
1l0l_H_4 - HH
1l0l_H_28 - HH
1l0l_J_5 - HH
1l0l_J_17 - HH
1l0l_B_65 - HH
1l0l_B_155 - HH
1l0l_B_116 - HH
1l0l_A_394 - HH
1l0l_A_372 - HH
1l0l_B_333 - HH

Homologous structures to 1l0l classified in ArchDB

1bcc A - percentage of sequence identity: 89
1be3 A - percentage of sequence identity: 100
1bgy A - percentage of sequence identity: 100
1bgy M - percentage of sequence identity: 100
1l0n A - percentage of sequence identity: 100
1ntk A - percentage of sequence identity: 100
1ntm A - percentage of sequence identity: 100
1ntz A - percentage of sequence identity: 100
1nu1 A - percentage of sequence identity: 100
1pp9 A - percentage of sequence identity: 100
1pp9 N - percentage of sequence identity: 100
1ppj A - percentage of sequence identity: 100
1ppj N - percentage of sequence identity: 100
1qcr A - percentage of sequence identity: 99
1rie - - percentage of sequence identity: 100
1sqb A - percentage of sequence identity: 100
1sqp A - percentage of sequence identity: 100
1sqq A - percentage of sequence identity: 100
1sqv A - percentage of sequence identity: 100
1sqx A - percentage of sequence identity: 100
2a06 A - percentage of sequence identity: 100
2a06 N - percentage of sequence identity: 100
2bcc A - percentage of sequence identity: 89
3bcc A - percentage of sequence identity: 89
null nu - percentage of sequence identity: 0