PDB: 1o6v Compound: internalin a Classification: BACTERIAL INFECTION Entry date in PDB: 2002-12-23 Resolution [Å]: 1.50 R-Factor: 0.147

CHAIN: A SWISS-PROT/TREMBL: P25146    KEYWORD: 3D-structure    Cell wall    Complete proteome    Leucine-rich repeat    Peptidoglycan-anchor    Repeat    Signal    3D-structure    Cell wall    Complete proteome    Leucine-rich repeat    Peptidoglycan-anchor    Repeat    Signal    SCOP: b.1.18.15 All beta proteins    Immunoglobulin-like beta-sandwich    E set domains    Internalin Ig-like domain    Internalin A    Listeria monocytogenes SCOP: c.10.2.1 Alpha and beta proteins (a/b)    Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)    L domain-like    Internalin LRR domain    Internalin A    Listeria monocytogenes GO:  cell surface    CHAIN: B SWISS-PROT/TREMBL: P25146    KEYWORD: 3D-structure    Cell wall    Complete proteome    Leucine-rich repeat    Peptidoglycan-anchor    Repeat    Signal    SCOP: b.1.18.15 All beta proteins    Immunoglobulin-like beta-sandwich    E set domains    Internalin Ig-like domain    Internalin A    Listeria monocytogenes SCOP: c.10.2.1 Alpha and beta proteins (a/b)    Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)    L domain-like    Internalin LRR domain    Internalin A    Listeria monocytogenes GO:  cell surface

Image Source: PDB

Loops in ArchDB40 clusters

1o6v_A_468 - HA => SUBCLASS : 2.3.2
1o6v_A_69 - EH => SUBCLASS : 1.1.13
1o6v_A_446 - AR => SUBCLASS : 4.32.1

Loops in ArchDB95 clusters

1o6v_A_69 - EH => SUBCLASS : 1.1.5
1o6v_A_69 - EH => SUBCLASS : 1.1.11
1o6v_A_446 - AR => SUBCLASS : 4.36.1
1o6v_A_51 - HE => SUBCLASS : 7.27.1
1o6v_A_468 - HA => SUBCLASS : 2.3.5
1o6v_A_452 - HA => SUBCLASS : 2.9.1

Loops not clustered in ArchDB

1o6v_A_409 - AR
1o6v_A_457 - AR
1o6v_A_427 - AR
1o6v_A_415 - AR
1o6v_A_42 - EH
1o6v_A_343 - HA
1o6v_A_365 - HA
1o6v_A_387 - HA
1o6v_A_80 - HA
1o6v_A_321 - HA
1o6v_A_299 - HA
1o6v_A_277 - HA
1o6v_A_102 - HA
1o6v_A_124 - HA
1o6v_A_146 - HA
1o6v_A_168 - HA
1o6v_A_190 - HA
1o6v_A_211 - HA
1o6v_A_233 - HA
1o6v_A_255 - HA
1o6v_A_72 - HE

1o6s A - percentage of sequence identity: 100
1o6t A - percentage of sequence identity: 100
1o6v A - percentage of sequence identity: 100
1o6v B - percentage of sequence identity: 100