PDB: 1r6j Compound: syntenin 1 Classification: MEMBRANE PROTEIN Entry date in PDB: 2004-05-04 Resolution [Å]: 0.73 R-Factor: 0.074

CHAIN: A SWISS-PROT/TREMBL: O00560    KEYWORD: 3D-structure    Cytoskeleton    Endoplasmic reticulum    Membrane    Nuclear protein    Phosphorylation    Polymorphism    Repeat    3D-structure    Cytoskeleton    Endoplasmic reticulum    Membrane    Nuclear protein    Phosphorylation    Polymorphism    Repeat    SCOP: b.36.1.1 All beta proteins    PDZ domain-like    PDZ domain-like    PDZ domain    Syntenin 1    Human (Homo sapiens) GO:  protein binding

Image Source: PDB

Loops in ArchDB40 clusters

1r6j_A_211 - HA => SUBCLASS : 2.1.1
1r6j_A_236 - HA => SUBCLASS : 2.4.2
1r6j_A_217 - EH => SUBCLASS : 4.19.1
1r6j_A_244 - EH => SUBCLASS : 5.9.1

Loops in ArchDB95 clusters

1r6j_A_217 - EH => SUBCLASS : 4.21.1
1r6j_A_244 - EH => SUBCLASS : 5.15.1
1r6j_A_211 - HA => SUBCLASS : 2.1.1
1r6j_A_236 - HA => SUBCLASS : 2.5.1

Loops not clustered in ArchDB

1r6j_A_197 - AR
1r6j_A_226 - HE
1r6j_A_251 - HE

1n99 A - percentage of sequence identity: 100
1n99 B - percentage of sequence identity: 100
1nte A - percentage of sequence identity: 100
1obx A - percentage of sequence identity: 100
1oby A - percentage of sequence identity: 100
1oby B - percentage of sequence identity: 100
1obz B - percentage of sequence identity: 100
1v1t A - percentage of sequence identity: 100
1v1t B - percentage of sequence identity: 100
1ybo A - percentage of sequence identity: 100
1ybo B - percentage of sequence identity: 100