ArchDB - Biological DataBase of Protein Loops

Information on 1s6b

PDB: 1s6b
Compound: phospholipase a2 isoform 1
Classification: HYDROLASE
Entry date in PDB: 2004-02-10
Resolution [Å]: 1.60
R-Factor: 0.212

CHAIN: A

SWISS-PROT/TREMBL: P60043
   KEYWORD: 3D-structure    Calcium    Hydrolase    Lipid degradation    Multigene family
EC: 3.1.1.4
SCOP: a.133.1.2 All alpha proteins    Phospholipase A2, PLA2    Phospholipase A2, PLA2    Vertebrate phospholipase A2    Snake phospholipase A2    Indian cobra (Naja naja sagittifera), isoform 2
GO:  calcium ion binding    phospholipase A2 activity    lipid catabolism

CHAIN: B

SWISS-PROT/TREMBL: P60044
   KEYWORD: 3D-structure    Calcium    Hydrolase    Lipid degradation    Multigene family
EC: 3.1.1.4
SCOP: a.133.1.2 All alpha proteins    Phospholipase A2, PLA2    Phospholipase A2, PLA2    Vertebrate phospholipase A2    Snake phospholipase A2    Indian cobra (Naja naja sagittifera), isoform 3
GO:  calcium ion binding    phospholipase A2 activity    lipid catabolism

Image Source: PDB

Stored Loops of 1s6b

Loops in ArchDB95 clusters

1s6b_A_76 - EH => SUBCLASS : 5.1.3
1s6b_B_76 - EH => SUBCLASS : 5.1.3
1s6b_A_2 - HH => SUBCLASS : 5.2.1
1s6b_A_85 - HH => SUBCLASS : 11.2.1
1s6b_A_40 - HE => SUBCLASS : 10.1.1
1s6b_B_40 - HE => SUBCLASS : 10.1.1
1s6b_A_70 - HA => SUBCLASS : 2.1.1
1s6b_B_70 - HA => SUBCLASS : 2.1.1

Loops not clustered in ArchDB

1s6b_A_20 - HH
1s6b_B_2 - HH
1s6b_B_85 - HH

Homologous structures to 1s6b classified in ArchDB

1a3d - - percentage of sequence identity: 84
1a3f A - percentage of sequence identity: 84
1a3f B - percentage of sequence identity: 84
1a3f C - percentage of sequence identity: 84
1dpy A - percentage of sequence identity: 61
1fe5 A - percentage of sequence identity: 62
1g2x A - percentage of sequence identity: 60
1gp7 A - percentage of sequence identity: 61
1gp7 B - percentage of sequence identity: 60
1gp7 C - percentage of sequence identity: 60
1ln8 A - percentage of sequence identity: 82
1m8t A - percentage of sequence identity: 66
1m8t B - percentage of sequence identity: 64
1m8t C - percentage of sequence identity: 64
1m8t D - percentage of sequence identity: 64
1m8t E - percentage of sequence identity: 64
1m8t F - percentage of sequence identity: 64
1mf4 A - percentage of sequence identity: 82
1mh2 A - percentage of sequence identity: 76
1mh2 B - percentage of sequence identity: 79
1mh7 A - percentage of sequence identity: 84
1mh8 A - percentage of sequence identity: 81
1ows A - percentage of sequence identity: 80
1ows B - percentage of sequence identity: 73
1oxr A - percentage of sequence identity: 83
1poa - - percentage of sequence identity: 88
1pob A - percentage of sequence identity: 83
1pob B - percentage of sequence identity: 83
1psh A - percentage of sequence identity: 84
1psh B - percentage of sequence identity: 84
1psh C - percentage of sequence identity: 84
1s6b A - percentage of sequence identity: 82
1s6b B - percentage of sequence identity: 82
1sz8 A - percentage of sequence identity: 88
1t37 A - percentage of sequence identity: 82
1td7 A - percentage of sequence identity: 83
1xxw A - percentage of sequence identity: 100
1xxw B - percentage of sequence identity: 82
1y75 A - percentage of sequence identity: 82
1y75 B - percentage of sequence identity: 79
1yxh A - percentage of sequence identity: 87
1yxl A - percentage of sequence identity: 83
1zm6 A - percentage of sequence identity: 82