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Information on SUBCLASS 2.6.4
Subclass Accession number: 8264
Subclass: 2.6.4 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 20.0 +/- 21.6
Average RMSD (Å) : 0.456 +/- 0.088

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXGhXX
(φψ)-conformation: aagpbb
Pattern: x[deh][FILV]x[aers][GN][FHLMV]x[AGIKLTV][aflptv]
Conservation:-0.8410.7730.825-0.616-0.1302.1860.140-0.807-0.753-0.777
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aoz_A_5101aoz   A511520PHLHMGMGVVHHHHTT-EEEaaaaagxbbb
1c4k_A_6281c4k   A633642QEFIRNHNKLHHHHTT-EEEaaaaavxbbx
1gyc_A_4561gyc   A457466FHLEAGFAIVHHHHTT-EEEaaaaavxbbb
1j9q_A_1421j9q   A144153WHVVSGMNGAHHHTTT-EEEaaaaavxbbb
1kcw_*_10241kcw   -10251034DHIHAGMETTHHHHHT-EEEaaaaagxbbb
1kcw_*_1661kcw   -168177KDIASGLIGPHHHHTT-EEEaaaaagxbbx
1kcw_*_3221kcw   -323332NHLKAGLQAFHHHHT--EEEaaaaavbbbx
1kcw_*_8681kcw   -868877KDLYSGLIGPHHHHTT-EEEaaaaagxbbw
2hgs_A_122hgs   A2534RALAEGVLLRHHHHTT-EEEaaaaavxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aoz_A_5101aoz   A     CUCOPPER (II) ION H - 512
1aoz_A_5101aoz   A     CUCOPPER (II) ION L - 513
1aoz_A_5101aoz   A     C2OCU-O-CU LINKAGE L - 513
1aoz_A_5101aoz   A     CUCOPPER (II) ION M - 517
1gyc_A_4561gyc   A     CUCOPPER (II) ION H - 458
1gyc_A_4561gyc   A     IPAISOPROPYL ALCOHOL H - 458
1gyc_A_4561gyc   A     CUCOPPER (II) ION L - 459
1gyc_A_4561gyc   A     IPAISOPROPYL ALCOHOL L - 459
1gyc_A_4561gyc   A     IPAISOPROPYL ALCOHOL E - 460
1gyc_A_4561gyc   A     IPAISOPROPYL ALCOHOL A - 461
1gyc_A_4561gyc   A     IPAISOPROPYL ALCOHOL G - 462
1gyc_A_4561gyc   A     CUCOPPER (II) ION F - 463
1j9q_A_1421j9q   A     NO2NITRITE ION V - 142
1j9q_A_1421j9q   A     CUCOPPER (II) ION H - 145
1j9q_A_1421j9q   A     CUCOPPER (II) ION M - 150
1kcw_*_1661kcw   *     CUCOPPER (II) ION A - 166
1kcw_*_1661kcw   *     OOXYGEN ATOM A - 166
1kcw_*_1661kcw   *     CUCOPPER (II) ION I - 170
1kcw_*_3221kcw   *     CUCOPPER (II) ION H - 324
1kcw_*_3221kcw   *     CUCOPPER (II) ION L - 329
1kcw_*_10241kcw   *     CUCOPPER (II) ION D - 1025
1kcw_*_10241kcw   *     CUCOPPER (II) ION H - 1026
1kcw_*_10241kcw   *     CUCOPPER (II) ION I - 1027
1kcw_*_10241kcw   *     CUCOPPER (II) ION A - 1029
1kcw_*_10241kcw   *     CUCOPPER (II) ION M - 1031
1kcw_*_10241kcw   *     NAGN-ACETYL-D-GLUCOSAMINE T - 1034
1kcw_*_10241kcw   *     OOXYGEN ATOM T - 1036
1kcw_*_10241kcw   *     NAGN-ACETYL-D-GLUCOSAMINE T - 1036
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gyc_A_4561gyc   A CU4CU BINDING SITE FOR CHAIN AH - 458
1gyc_A_4561gyc   A IP2IPA BINDING SITE FOR CHAIN AE - 460
1gyc_A_4561gyc   A CU4CU BINDING SITE FOR CHAIN AF - 463
1kcw_*_3221kcw   * CU1TYPE I CU BINDING SITE IN DOMAIN 2. AT BEST LEU 329 MAY HAVE VAN DER WAALS CONTACT WITH THE CU.H - 324
1kcw_*_3221kcw   * CU1TYPE I CU BINDING SITE IN DOMAIN 2. AT BEST LEU 329 MAY HAVE VAN DER WAALS CONTACT WITH THE CU.L - 329
1kcw_*_10241kcw   * CU5LABILE CU BINDING SITE IN DOMAIN 6.D - 1025
1kcw_*_10241kcw   * CU4TYPE I CU BINDING SITE IN DOMAIN 6.H - 1026
1kcw_*_10241kcw   * CU4TYPE I CU BINDING SITE IN DOMAIN 6.M - 1031

Clusters included in this Subclass
CLUSTER: HE.2.50
CLUSTER: HE.3.67
CLUSTER: HE.4.100