Information on SUBCLASS 5.36.1 |
Subclass Accession number: 397
Subclass: 5.36.1 ![]() Type: HE alpha-beta DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation EC : 1.10 (>75 %) 1.10.2 (>75 %) 1.10.2.2 (>75 %) GO : GO:0004175 (>75 %) GO:0004222 (>75 %) GO:0005386 (>75 %) GO:0008121 (>75 %) GO:0008233 (>75 %) GO:0008237 (>75 %) GO:0008324 (>75 %) GO:0015075 (>75 %) GO:0015077 (>75 %) GO:0015078 (>75 %) GO:0015399 (>75 %) GO:0016679 (>75 %) GO:0016681 (>75 %) SCOP : 63410 (>75 %) 63411 (>75 %) 63412 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 11.1 +/- 11.7 Average RMSD (Å) : 0.733 +/- 0.058 Consensus geometry
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Consensus Sequence: | XpXXXXpph |
(φψ)-conformation: | aabaababb |
Pattern: | x | x | [EL] | [EKY] | x | [APS] | [DSV] | [CT] | [DHR] | [KT] | [LV] | [LPY] |
Conservation: | -0.668 | -1.162 | 0.045 | -0.052 | -1.038 | 0.195 | -0.915 | 1.656 | 0.195 | 1.119 | 1.542 | -0.915 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ga8_A_89 | 1ga8 | A | 89 | 100 | LGEYIADCDKVL | HHHH--S-S-EE | aaaabaababbb |
1o50_A_23 | 1o50 | A | 29 | 40 | RILEDPVTRTVY | HHHHSTT--EEE | aaaabaaxabxb |
1pfo_*_151 | 1pfo | - | 165 | 176 | WNEKYSSTHTLP | HHHHTTT--EEE | aaaabaababbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ga8_A_89 | 1ga8 | A | MSESELENOMETHIONINE | L - 100 |
1ga8_A_89 | 1ga8 | A | UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE | Y - 101 |
1ga8_A_89 | 1ga8 | A | UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE | L - 102 |
Clusters included in this Subclass |
CLUSTER: HE.5.167 |