Information on SUBCLASS 3.1.5 |
Subclass Accession number: 2270
Subclass: 3.1.5 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 11.4 +/- 13.8 Average RMSD (Å) : 0.800 +/- 0.261 Consensus geometry
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Consensus Sequence: | hpGXXXX |
(φψ)-conformation: | aalbpaa |
Pattern: | x | x | [ailv] | [dnt] | [GK] | [aefkl] | [dps] | x | x | [AGKL] | [ekqt] | [aklm] | x | [aekr] |
Conservation: | -0.609 | -0.518 | -0.113 | 0.495 | 3.260 | -0.913 | -0.204 | -0.237 | -0.548 | -0.196 | 0.195 | -0.161 | -0.365 | -0.086 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a9x_A_306 | 1a9x | A | 312 | 325 | SKATGFPIAKVAAK | HHHHS--HHHHHHH | aaaavbxaaaaaaa |
1bpy_A_67 | 1bpy | A | 76 | 89 | FLATGKLRKLEKIR | HHHHSS-HHHHHHH | aaaavbbaaaaaaa |
1dv1_A_297 | 1dv1 | A | 301 | 314 | EMITGVDLIKEQLR | HHHH---HHHHHHH | aaaavxxaaaaaaa |
1ex2_A_167 | 1ex2 | A | 168 | 181 | YSVMGLPISKTMRA | HHHHT--HHHHHHH | aaaagbxaaaaaaa |
1jms_A_219 | 1jms | A | 228 | 241 | IIEDGESSEAKAVL | HHHHSS-HHHHHHH | aaaavbbaaaaaaa |
1o4w_A_24 | 1o4w | A | 24 | 37 | VYLNKADVVGQLRE | HHHHT--HHHHHHH | aaaalbxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a9x_A_306 | 1a9x | A | ADPADENOSINE-5'-DIPHOSPHATE | R - 306 |
1a9x_A_306 | 1a9x | A | MNMANGANESE (II) ION | R - 306 |
1a9x_A_306 | 1a9x | A | PO4PHOSPHATE ION | R - 306 |
1a9x_A_306 | 1a9x | A | PO4PHOSPHATE ION | S - 307 |
1o4w_A_24 | 1o4w | A | MSESELENOMETHIONINE | V - 24 |
1o4w_A_24 | 1o4w | A | MSESELENOMETHIONINE | Y - 25 |
1o4w_A_24 | 1o4w | A | MSESELENOMETHIONINE | L - 26 |
1o4w_A_24 | 1o4w | A | MSESELENOMETHIONINE | N - 27 |
Clusters included in this Subclass |
CLUSTER: HH.2.148 |
CLUSTER: HH.3.249 |
CLUSTER: HH.4.219 |