Information on SUBCLASS 5.30.1 |
Subclass Accession number: 2477
Subclass: 5.30.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>75 %) 1.1.1 (>75 %) GO : GO:0016614 (>75 %) GO:0016616 (>75 %) SCOP : 51734 (>75 %) 51735 (>75 %) 51751 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 15.2 +/- 15.7 Average RMSD (Å) : 0.900 +/- 0.346 Consensus geometry
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Consensus Sequence: | pXhhhppXX |
(φψ)-conformation: | aapwaapaa |
Pattern: | [GR] | x | [ILM] | [QR] | [AK] | [LP] | [LP] | [IW] | [DQ] | [DNQ] | [PQ] | [AEL] | x | [KLV] | [ADR] | x | [KV] | [AIL] | [CGM] | [CL] | [ELM] | [GIV] |
Conservation: | 0.367 | -0.707 | 0.901 | 1.490 | 0.218 | -0.435 | 0.399 | 2.000 | 1.473 | 0.472 | 1.442 | -1.243 | -1.243 | -0.814 | -1.028 | -0.921 | -0.237 | -0.278 | -0.921 | 0.691 | -0.707 | -0.921 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a0p_*_115 | 1a0p | - | 120 | 141 | RLLQAPLIDQPLELRDKAMLEV | HHHH-S-TTSHHHHHHHHHHHH | aaaaaxxaaxaaaaaaaaaaaa |
1ehk_A_334 | 1ehk | A | 334 | 355 | GWIRALPWDNPAFVAPVLGLLG | HHHHHS-TT-HHHHHHHHHHHH | aaaaaxwaaxaaaaaaaaaaaa |
1uw4_B_788 | 1uw4 | B | 793 | 814 | RQMRKLPWQDQEVKDYVICCMI | HHHHTS-TTSHHHHHHHHHHHH | aaaaaxwaaxaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ehk_A_334 | 1ehk | A | HASHEME-AS | W - 335 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | I - 336 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | L - 339 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | W - 341 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | V - 350 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | L - 353 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | L - 354 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | F - 356 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | I - 357 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | G - 359 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | G - 360 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | A - 361 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | G - 362 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | G - 363 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | I - 364 |
1ehk_A_334 | 1ehk | A | HASHEME-AS | N - 366 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1uw4_B_788 | 1uw4 | B | AC1BME BINDING SITE FOR CHAIN B | C - 811 |
1uw4_B_788 | 1uw4 | B | AC1BME BINDING SITE FOR CHAIN B | C - 812 |
Clusters included in this Subclass |
CLUSTER: HH.5.263 |