Information on SUBCLASS 2.3.9 |
Subclass Accession number: 2227
Subclass: 2.3.9 ![]() Type: HH alpha-alpha DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 7 Average sequence ID (%) : 14.8 +/- 16.4 Average RMSD (Å) : 0.614 +/- 0.204 Consensus geometry
|
Consensus Sequence: | XXXXhX |
(φψ)-conformation: | aabpaa |
Pattern: | [ILPTV] | [AFGLW] | [akltv] | x | [ity] | [npr] | [lpvy] | x | [elm] | [ILVW] |
Conservation: | 0.588 | -0.517 | -1.111 | -1.112 | 0.141 | 0.559 | -0.930 | -0.232 | 0.518 | 2.097 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e0t_A_244 | 1e0t | A | 247 | 256 | LGVEIPVEEV | HHHHS-HHHH | aaaabpaaaa |
1gvf_A_53 | 1gvf | A | 53 | 62 | TFKHIALEEI | HHHHS-HHHH | aaaabxaaaa |
1h32_B_67 | 1h32 | B | 67 | 76 | VAARYPEAMI | HHHHS-HHHH | aaaabxaaaa |
1k3p_A_73 | 1k3p | A | 76 | 85 | LATDSNYLEV | HHHHS-HHHH | aaaabbaaaa |
1lgh_A_9 | 1lgh | A | 9 | 18 | IWLVINPSTW | HHHHS-HHHH | aaaabxaaaa |
1m2k_A_38 | 1m2k | A | 38 | 47 | LWNRYRPEEL | HHHHS-HHHH | aaaaxbaaaa |
1q44_A_103 | 1q44 | A | 103 | 112 | PLLVTNPHLL | HHHHS-HHHH | aaaabxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h32_B_67 | 1h32 | B | HB1HEC BINDING SITE FOR CHAIN B | R - 70 |
1h32_B_67 | 1h32 | B | HB1HEC BINDING SITE FOR CHAIN B | Y - 71 |
1h32_B_67 | 1h32 | B | HB1HEC BINDING SITE FOR CHAIN B | I - 79 |
1lgh_A_9 | 1lgh | A | B8ARESIDUES INVOLVED IN B850 BCHL-A BINDING TO THE ALPHA-SUBUNIT | H - 34 |
Clusters included in this Subclass |
CLUSTER: HH.1.57 |
CLUSTER: HH.3.174 |