Information on SUBCLASS 5.32.1 |
Subclass Accession number: 393
Subclass: 5.32.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.5 (>75 %) 2.5.1 (>75 %) 2.5.1.16 (>75 %) GO : GO:0004766 (>75 %) GO:0005509 (>75 %) GO:0008168 (>75 %) GO:0008757 (>75 %) GO:0016741 (>75 %) GO:0016765 (>75 %) GO:0016829 (>50 %) SCOP : 47472 (>75 %) 47473 (>75 %) 47478 (>75 %) 53334 (>75 %) 53335 (>75 %) 69557 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 12.5 +/- 12.4 Average RMSD (Å) : 1.133 +/- 0.321 Consensus geometry
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Consensus Sequence: | XphXphXXp |
(φψ)-conformation: | aalbbbpbb |
Pattern: | [AP] | [QRY] | [APS] | [LY] | x | [DG] | [AKL] | [FL] | [DP] | [AKR] | [FIY] | [KNQ] | [AKT] | x | [RST] | [FG] | x | [DY] | [AFI] | [DKP] | x | [HR] | [AIV] | [DG] |
Conservation: | 0.480 | -0.359 | -0.359 | 0.473 | -1.496 | 1.465 | -1.496 | 0.899 | 1.561 | -0.217 | 0.778 | 0.352 | -0.785 | -1.212 | -0.501 | 0.321 | -1.496 | 0.400 | -1.070 | -0.501 | -0.501 | 1.759 | 0.068 | 1.436 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1azs_B_967 | 1azs | B | 976 | 999 | AYALVGKLDAINKHSFNDFKLRVG | HHHHHHHHHHHHHHHT-----EEE | aaaaaaaaaaaaaaalbbxbxbbb |
1ile_*_57 | 1ile | - | 60 | 83 | ARSYKDLFPRYKTMRGYYAPRRAG | HHHHHHHHHHHHHHTT-B---EEE | aaaaaaaaaaaaaaavbxbxbbbb |
1pmm_A_220 | 1pmm | A | 220 | 243 | PQPLHDALDKFQADTGIDIDMHID | HHHHHHHHHHHHHHH-----EEEE | aaaaaaaaaaaaaaavxbbxbbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1pmm_A_220 | 1pmm | A | PLPPYRIDOXAL-5'-PHOSPHATE | D - 243 |
Clusters included in this Subclass |
CLUSTER: HE.6.107 |