Logo
Information on SUBCLASS 3.26.1
Subclass Accession number: 616
Subclass: 3.26.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 15.2 +/- 16.2
Average RMSD (Å) : 0.600 +/- 0.173

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hcXXGXX
(φψ)-conformation: bbaggbb
Pattern: [MPT][AKT][AFG][DK][TWY][GR][G][FKV][GNP]xx
Conservation:-0.428-0.359-0.6350.5870.2620.3002.678-0.842-0.290-0.704-0.566
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1im3_D_721im3   D7686PKADYGGVGENEEEESSS-EEEwbxbavgbbbx
1l0l_E_871l0l   E8797MAFKWRGKPLFEEEESSSSEEEbbbbagvbpbb
2dap_*_2442dap   -250260TTGDTGGFNHTEEEESSS-EEEbbbbagvbxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
2dap_*_2442dap   *     API2,6-DIAMINOPIMELIC ACID H - 244
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
2dap_*_2442dap   * DAPDIAMINOPIMELATE BINDING SITE.H - 244

Clusters included in this Subclass
CLUSTER: HA.3.195