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Information on SUBCLASS 2.3.5
Subclass Accession number: 2817
Subclass: 2.3.5 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 16.7 +/- 26.2
Average RMSD (Å) : 0.800 +/- 0.183

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXpphp
(φψ)-conformation: bbapaa
Pattern: [CER][CFY]x[LT][ENS][ANRS][GW][HNR]xx[AMP]
Conservation:-0.6290.738-1.1470.4690.391-0.3782.0170.939-1.202-0.842-0.355
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
16vp_A_25616vp   A257267CCDLESWRQLAEEEES-SHHHHbbbbabaaaaa
1gpu_A_621gpu   A6272RFVLSNGHAVAEEEESSGGGHHbbbxaxaaaaa
1itz_A_711itz   A7181RFVLSAGHGCMEEEESSGGGHHbbbxaxaaaaa
2bos_A_1272bos   A128138EYWTNRWNLQPEEEE--TTHHHxbbbaxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpu_A_621gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE N - 67
1gpu_A_621gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE G - 68
1gpu_A_621gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE H - 69
1gpu_A_621gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE A - 70
1itz_A_711itz   A     TPPTHIAMINE DIPHOSPHATE A - 76
1itz_A_711itz   A     TPPTHIAMINE DIPHOSPHATE H - 78
2bos_A_1272bos   A     GALD-GALACTOSE E - 128
2bos_A_1272bos   A     GALD-GALACTOSE Y - 129
2bos_A_1272bos   A     GALD-GALACTOSE W - 130
2bos_A_1272bos   A     GLCGLUCOSE W - 130
2bos_A_1272bos   A     GALD-GALACTOSE T - 131
2bos_A_1272bos   A     GALD-GALACTOSE N - 132
2bos_A_1272bos   A     GALD-GALACTOSE R - 133
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gpu_A_621gpu   A AC2THD BINDING SITE FOR CHAIN AH - 69

Clusters included in this Subclass
CLUSTER: EH.4.231