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Information on SUBCLASS 2.2.7
Subclass Accession number: 127
Subclass: 2.2.7 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005507 (>75 %)  GO:0046914 (>75 %)  
SCOP : 49502 (>75 %)  49503 (>75 %)  49550 (>75 %)  
 Number of loops: 7

Average sequence ID (%) : 23.1 +/- 20.3
Average RMSD (Å) : 0.514 +/- 0.157

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XpGhXh
(φψ)-conformation: aagpbb
Pattern: xx[h][filv]x[gknst][G][ALM]x[GILV]x[FIL][AKLMT]
Conservation:-0.919-0.6811.694-0.249-0.647-0.3442.3010.538-0.607-0.444-0.8090.535-0.368
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aoz_A_5101aoz   A510522EPHLHMGMGVVFAHHHHHTT-EEEEEaaaaaagxbbbbb
1gw0_A_5061gw0   A506518AWHVSGGLSVDFLHHHHHHT-EEEEEaaaaaagxbbbxx
1hfu_A_4551hfu   A455467EFHLMNGLAIVFAHHHHHTT-EEEEEaaaaaagxbbbbx
1kbv_A_1401kbv   A141153GMHIANGMYGLILHHHHHTT-EEEEEaaaaaagxbbbbx
1kbv_A_2921kbv   A292304FRAFNKGALGQLKHHHHHSS-EEEEEaaaaaagxbbbbx
1kv7_A_5031kv7   A503515LEHEDTGMMLGFTHHHHHTT-EEEEEaaaaaagxbbbbb
1oe1_A_1361oe1   A137149PWHVVSGMSGTLMHHHHHTT-EEEEEaaaaaagxbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aoz_A_5101aoz   A     CUCOPPER (II) ION H - 512
1aoz_A_5101aoz   A     CUCOPPER (II) ION L - 513
1aoz_A_5101aoz   A     C2OCU-O-CU LINKAGE L - 513
1aoz_A_5101aoz   A     CUCOPPER (II) ION M - 517
1gw0_A_5061gw0   A     CUCOPPER (II) ION H - 508
1gw0_A_5061gw0   A     CUCOPPER (II) ION V - 509
1hfu_A_4551hfu   A     CUCOPPER (II) ION H - 457
1hfu_A_4551hfu   A     CUCOPPER (II) ION L - 458
1hfu_A_4551hfu   A     CUCOPPER (II) ION L - 462
1kbv_A_1401kbv   A     NO2NITRITE ION V - 140
1kbv_A_1401kbv   A     CUCOPPER (II) ION H - 143
1kbv_A_1401kbv   A     CUCOPPER (II) ION I - 144
1kbv_A_1401kbv   A     NO2NITRITE ION I - 144
1kbv_A_1401kbv   A     CUCOPPER (II) ION M - 148
1kbv_A_2921kbv   A     NO2NITRITE ION F - 295
1kv7_A_5031kv7   A     CUCOPPER (II) ION L - 503
1kv7_A_5031kv7   A     C2OCU-O-CU LINKAGE L - 503
1kv7_A_5031kv7   A     CUCOPPER (II) ION H - 505
1kv7_A_5031kv7   A     CUCOPPER (II) ION E - 506
1kv7_A_5031kv7   A     C2OCU-O-CU LINKAGE E - 506
1kv7_A_5031kv7   A     CUCOPPER (II) ION M - 510
1kv7_A_5031kv7   A     CUCOPPER (II) ION M - 511
1kv7_A_5031kv7   A     C2OCU-O-CU LINKAGE M - 511
1oe1_A_1361oe1   A     CUCOPPER (II) ION H - 139
1oe1_A_1361oe1   A     CUCOPPER (II) ION M - 144
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gw0_A_5061gw0   A AC2CU BINDING SITE FOR CHAIN AH - 508
1gw0_A_5061gw0   A AC2CU BINDING SITE FOR CHAIN AL - 513
1hfu_A_4551hfu   A T1TYPE 1 CU BINDING SITE.H - 457
1hfu_A_4551hfu   A T1TYPE 1 CU BINDING SITE.L - 462
1oe1_A_1361oe1   A AC1CU BINDING SITE FOR CHAIN AH - 139
1oe1_A_1361oe1   A AC1CU BINDING SITE FOR CHAIN AM - 144

Clusters included in this Subclass
CLUSTER: HE.3.56