Information on SUBCLASS 2.3.20 |
Subclass Accession number: 5382
Subclass: 2.3.20 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 15.0 +/- 15.2 Average RMSD (Å) : 0.633 +/- 0.058 Consensus geometry
|
Consensus Sequence: | phFXXX |
(φψ)-conformation: | aababb |
Pattern: | [AQ] | [AKV] | x | [CS] | x | x | [FL] | x | [KRT] | [QST] | [AVY] | [AG] | [DHR] | [FMY] | [F] | [DP] | x | [AIT] | x | [IV] |
Conservation: | 0.283 | -0.711 | -0.630 | 0.430 | -0.793 | -0.874 | 0.491 | -1.036 | -0.062 | -0.143 | -0.549 | 0.491 | -0.224 | 0.507 | 3.107 | 0.862 | -0.874 | -0.549 | -1.036 | 1.311 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1kgd_A_865 | 1kgd | A | 871 | 890 | QKESDILQRTYAHYFDLTII | HHHHHHHHHHHGGG-SEEEE | aaaaaaaaaaaaaaxabbbx |
1oqv_A_117 | 1oqv | A | 117 | 136 | QAQCKTLITSVGDMFPYIAI | HHHHHHHHHHHGGG-SEEEE | aaaaaaaaaaaaaababbbb |
1p9l_A_107 | 1p9l | A | 109 | 128 | AVLSMHFAKQAARFFDSAEV | HHHHHHHHHHHGGG-SEEEE | aaaaaaaaaaaaaababbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kgd_A_865 | 1kgd | A | FMTFORMIC ACID | S - 866 |
1kgd_A_865 | 1kgd | A | FMTFORMIC ACID | L - 867 |
1kgd_A_865 | 1kgd | A | FMTFORMIC ACID | L - 870 |
1p9l_A_107 | 1p9l | A | PDCPYRIDINE-2,6-DICARBOXYLIC ACID | H - 132 |
Clusters included in this Subclass |
CLUSTER: HE.4.360 |
CLUSTER: HE.6.119 |