Information on SUBCLASS 4.3.1 |
Subclass Accession number: 8426
Subclass: 4.3.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 12.3 +/- 16.0 Average RMSD (Å) : 1.018 +/- 0.204 Consensus geometry
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Consensus Sequence: | XhchpXhh |
(φψ)-conformation: | aalpapbb |
Pattern: | x | x | [AILVY] | x | x | [iltvy] | [akl] | [DEHKQ] | x | [ACFILMVWY] | [egkn] | [filptv] | [DEKNPST] | [degn] | x | [afimvy] | x | [afgimtv] |
Conservation: | -1.288 | -0.916 | 0.946 | -0.446 | -0.652 | 0.711 | 0.230 | 2.312 | -0.942 | 0.033 | 1.821 | -0.914 | 0.821 | -0.523 | -0.366 | -0.420 | 0.388 | -0.795 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a0c_A_201 | 1a0c | A | 213 | 230 | HMAVDYAKEIGFEGQFLI | HHHHHHHHHTT--SEEEE | aaaaaaaaaavxaxxxbb |
1a0e_A_201 | 1a0e | A | 213 | 230 | RMAVDYAKRIGFTGQFLI | HHHHHHHHHTT--SEEEE | aaaaaaaaaalxaxxxbb |
1doz_A_196 | 1doz | A | 202 | 219 | ESAKLIAEGAGVSEYAVG | HHHHHHHHHHT---EEEE | aaaaaaaaaavxabbbbb |
1dqu_A_217 | 1dqu | A | 225 | 242 | VAIRAQADIMGTDLLAIA | HHHHHHHHHTT---EEEE | aaaaaaaaaalbapbxbx |
1e6u_A_253 | 1e6u | A | 255 | 272 | ELAQTIAKVVGYKGRVVF | HHHHHHHHHHT--SEEEE | aaaaaaaaaavxaxbxbb |
1ffw_A_15 | 1ffw | A | 19 | 36 | RIVRNLLKELGFNNVEEA | HHHHHHHHHTT---EEEE | aaaaaaaaaavbaxbbbb |
1jys_A_52 | 1jys | A | 57 | 74 | LGATLLLEHCKPDVIINT | HHHHHHHHHH--SEEEEE | aaaaaaaaaalxabbbbb |
1lar_A_1787 | 1lar | A | 1794 | 1811 | GQVHKTKEQFGQDGPITV | HHHHHHHHHTT--S-EEE | aaaaaaaaaalxaxxxxb |
1od0_A_329 | 1od0 | A | 333 | 350 | WILKKVKEEYNPPEVYIT | HHHHHHHHHH--S-EEEE | aaaaaaaaaalxabbbxa |
1p42_A_78 | 1p42 | A | 78 | 95 | EHILSVLHLLEITNVTIE | HHHHHHHHHTT--SEEEE | aaaaaaaaaalxabbbbx |
2dnj_A_140 | 2dnj | A | 149 | 166 | DVYLDVQQKWHLNDVMLM | HHHHHHHHHH----EEEE | aaaaaaaaaalbaxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1doz_A_196 | 1doz | A | MO6MAGNESIUM ION, 6 WATERS COORDINATED | Q - 199 |
1doz_A_196 | 1doz | A | MO6MAGNESIUM ION, 6 WATERS COORDINATED | Q - 221 |
1ffw_A_15 | 1ffw | A | PONIMIDO DIPHOSPHATE | S - 15 |
1ffw_A_15 | 1ffw | A | PONIMIDO DIPHOSPHATE | T - 16 |
1ffw_A_15 | 1ffw | A | PONIMIDO DIPHOSPHATE | R - 18 |
1jys_A_52 | 1jys | A | ADEADENINE | S - 76 |
1jys_A_52 | 1jys | A | ADEADENINE | A - 77 |
1jys_A_52 | 1jys | A | ADEADENINE | G - 78 |
1p42_A_78 | 1p42 | A | ZNZINC ION | E - 78 |
1p42_A_78 | 1p42 | A | MYRMYRISTIC ACID | E - 78 |
1p42_A_78 | 1p42 | A | ZNZINC ION | H - 79 |
1p42_A_78 | 1p42 | A | MYRMYRISTIC ACID | H - 79 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e6u_A_253 | 1e6u | A | AC2UVW BINDING SITE FOR CHAIN A | K - 262 |
Clusters included in this Subclass |
CLUSTER: HE.4.199 |
CLUSTER: HE.5.86 |
CLUSTER: HE.6.58 |