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Information on SUBCLASS 5.4.4
Subclass Accession number: 4887
Subclass: 5.4.4 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 9.3 +/- 14.3
Average RMSD (Å) : 0.900 +/- 0.265

Consensus geometry
d (Å): 17 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hpXXXhXXX
(φψ)-conformation: aalppppaa
Pattern: [AL][LM]x[ENT][ALV][KT][GQ]x[KPS][IPW][NPS]x[ADS]xx[AR][GKL][GPT]
Conservation:0.6172.254-0.5230.3650.1121.1601.112-0.9030.112-1.1570.239-0.7760.112-0.396-1.4111.016-1.537-0.396
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a59_*_2971a59   -308325AMEEAKQIKPNLDYPAGPHHHHHH---B-THHHHHHaaaaaalbxxbaaaaaaa
1ehk_A_4041ehk   A404421LLPNLTGKPISDAQRRLGHHHHHH-----HHHHHHHaaaaaagxxbxaaaaaaa
1h1r_B_3521h1r   B363380ALYTVTGQSWPESLIRKTHHHHHHS--S-HHHHHHHaaaaaavxbpxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a59_*_2971a59   *     COACOENZYME A M - 309
1a59_*_2971a59   *     COACOENZYME A K - 313
1a59_*_2971a59   *     COACOENZYME A I - 315
1a59_*_2971a59   *     CITCITRIC ACID N - 318
1a59_*_2971a59   *     COACOENZYME A N - 318
1a59_*_2971a59   *     CITCITRIC ACID L - 319
1a59_*_2971a59   *     CITCITRIC ACID D - 320
1a59_*_2971a59   *     COACOENZYME A D - 320
1ehk_A_4041ehk   A     HEMPROTOPORPHYRIN IX CONTAINING FE W - 428
1ehk_A_4041ehk   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 432
1ehk_A_4041ehk   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 435
1ehk_A_4041ehk   A     BNGB-NONYLGLUCOSIDE A - 436
1ehk_A_4041ehk   A     BNGB-NONYLGLUCOSIDE V - 437
1ehk_A_4041ehk   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 439
1ehk_A_4041ehk   A     BNGB-NONYLGLUCOSIDE H - 440
1ehk_A_4041ehk   A     BNGB-NONYLGLUCOSIDE W - 441
1ehk_A_4041ehk   A     BNGB-NONYLGLUCOSIDE A - 442
1ehk_A_4041ehk   A     BNGB-NONYLGLUCOSIDE L - 444

Clusters included in this Subclass
CLUSTER: HH.5.282