Home

Classification

Query

Statistics

Contact

Links

Help

PDB code:

Information on SUBCLASS 2.1.14

Subclass Accession number: 1054 Subclass: 2.1.14 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates:

Number of loops: 15 Average sequence ID (%) : 16.0 +/- 18.1 Average RMSD (Å) : 0.500 +/- 0.136 Consensus geometry d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ejb_A_123	1ejb	A	124	133	LLTCMTEEQA	EEEESSHHHH	xxbxabaaaa
1ezv_B_283	1ezv	B	288	297	FVRDQDSAVV	EEEESSHHHH	bbbbaxaaaa
1geg_A_28	1geg	A	30	39	AIADYNDATA	EEEES-HHHH	xxxbaxaaaa
1gqi_A_111	1gqi	A	115	124	IVAANSDVGV	EEEESSHHHH	bbbbabaaaa
1hdc_A_32	1hdc	A	34	43	VLADVLDEEG	EEEES-HHHH	bxxbaxaaaa
1hru_A_59	1hru	A	59	68	ILIAANYEQL	EEEESSHHHH	bbbbabaaaa
1iat_A_241	1iat	A	243	252	VALSTNTTKV	EEEES-HHHH	bbbbabaaaa
1in0_A_47	1in0	A	49	58	KITTESDFQL	EEEES-HHHH	xbbbabaaaa
1k2w_A_30	1k2w	A	33	42	AIADINLEAA	EEEES-HHHH	bxxbabaaaa
1m22_A_260	1m22	A	262	271	GPMARSVADA	EEEESSHHHH	bxbbabaaaa
1m6y_A_50	1m6y	A	52	61	IGIDVDSEVL	EEEES-HHHH	bbbbaxaagg
1nqu_A_111	1nqu	A	115	124	VITADTLEQA	EEEESSHHHH	xxbbabaaaa
1nxq_A_32	1nxq	A	34	43	MITGRHSDVG	EEEES-HHHH	bbbbabaaaa
1vdw_A_234	1vdw	A	236	245	IIAANNEELL	EEEES-HHHH	bbbbabaaaa
1vj0_A_210	1vj0	A	212	221	IVIAGSPNRL	EEEES-HHHH	bbbbabaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ejb_A_123	1ejb	A	INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID	G - 123
1ejb_A_123	1ejb	A	INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID	R - 136
1geg_A_28	1geg	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	A - 32
1geg_A_28	1geg	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	D - 33
1geg_A_28	1geg	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	Y - 34
1geg_A_28	1geg	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	N - 35
1geg_A_28	1geg	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	T - 38
1gqi_A_111	1gqi	A	EDO1,2-ETHANEDIOL	Y - 126
1gqi_A_111	1gqi	A	EDO1,2-ETHANEDIOL	G - 127
1gqi_A_111	1gqi	A	EDO1,2-ETHANEDIOL	F - 129
1gqi_A_111	1gqi	A	EDO1,2-ETHANEDIOL	H - 130
1gqi_A_111	1gqi	A	EDO1,2-ETHANEDIOL	R - 133
1in0_A_47	1in0	A	HGMERCURY (II) ION	I - 48
1in0_A_47	1in0	A	MMCMETHYL MERCURY ION	I - 48
1in0_A_47	1in0	A	HGMERCURY (II) ION	I - 64
1in0_A_47	1in0	A	MMCMETHYL MERCURY ION	I - 64
1in0_A_47	1in0	A	HGMERCURY (II) ION	L - 65
1in0_A_47	1in0	A	MMCMETHYL MERCURY ION	L - 65
1in0_A_47	1in0	A	HGMERCURY (II) ION	I - 66
1in0_A_47	1in0	A	MMCMETHYL MERCURY ION	I - 66
1in0_A_47	1in0	A	HGMERCURY (II) ION	G - 67
1in0_A_47	1in0	A	MMCMETHYL MERCURY ION	G - 67
1in0_A_47	1in0	A	HGMERCURY (II) ION	S - 68
1in0_A_47	1in0	A	MMCMETHYL MERCURY ION	S - 68
1in0_A_47	1in0	A	HGMERCURY (II) ION	C - 69
1in0_A_47	1in0	A	MMCMETHYL MERCURY ION	C - 69
1in0_A_47	1in0	A	HGMERCURY (II) ION	I - 70
1in0_A_47	1in0	A	MMCMETHYL MERCURY ION	I - 70
1m6y_A_50	1m6y	A	SAHS-ADENOSYL-L-HOMOCYSTEINE	I - 54
1m6y_A_50	1m6y	A	MSESELENOMETHIONINE	D - 55
1m6y_A_50	1m6y	A	SAHS-ADENOSYL-L-HOMOCYSTEINE	D - 55
1m6y_A_50	1m6y	A	MSESELENOMETHIONINE	V - 56
1m6y_A_50	1m6y	A	SAHS-ADENOSYL-L-HOMOCYSTEINE	V - 56
1m6y_A_50	1m6y	A	MSESELENOMETHIONINE	D - 57
1m6y_A_50	1m6y	A	SAHS-ADENOSYL-L-HOMOCYSTEINE	D - 57
1m6y_A_50	1m6y	A	MSESELENOMETHIONINE	S - 58
1m6y_A_50	1m6y	A	SAHS-ADENOSYL-L-HOMOCYSTEINE	V - 60
1nqu_A_111	1nqu	A	RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE	I - 111
1nqu_A_111	1nqu	A	RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE	T - 112
1nqu_A_111	1nqu	A	RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE	F - 113
1nqu_A_111	1nqu	A	RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE	G - 114
1nqu_A_111	1nqu	A	PO4PHOSPHATE ION	T - 117

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1gqi_A_111	1gqi	A	AC4EDO BINDING SITE FOR CHAIN A	H - 130
1gqi_A_111	1gqi	A	AC2EDO BINDING SITE FOR CHAIN A	R - 133

Clusters included in this Subclass

CLUSTER: EH.1.31

For any comment or web-related incidence, send an email to the webmaster.