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Information on SUBCLASS 2.1.4
Subclass Accession number: 110
Subclass: 2.1.4 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 8.7 +/- 12.2
Average RMSD (Å) : 0.757 +/- 0.174

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXcXXh
(φψ)-conformation: aalpbb
Pattern: x[cehkrwy]xx[DEGNQR]xx[aflmpvy]x
Conservation:-0.733-0.092-0.569-0.3902.509-0.181-0.7870.1480.093
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b4a_A_381b4a   A4553IKEMQLVKVHHHTT-EEEaaaalxbbb
1bu8_A_311bu8   A3139PEDIDTRFLHHHHT-EEEaaaalxbbb
1fp5_A_4071fp5   A409417DWIEGETYQHHHTT--EEaaaagpbbb
1gny_A_1571gny   A159167FKASEANLQHHHHT-EEEaaaavxbbb
1h6f_A_1101h6f   A116124FHKRGTEMVHHHH--EEEaaaavxbbx
1hc7_A_2351hc7   A237245ARAFDIKFQHHHTT-EEEaaaalbbbx
1hsk_A_1441hsk   A147154AVYMNAGA.HHHHT-EE.aaaalpbb.
1i27_A_4861i27   A497505LKRLNPERKHHHH--EEEaaaalxpxb
1kfw_A_1491kfw   A162170LYIKGNLPNHHTS--EEEaaaavxbxx
1l6x_A_3101l6x   A312320DWLNGKEYKHHHTT--EEaaaavxxbb
1l6x_A_4141l6x   A416424RWQQGNVFSHHHTT--EEaaaavxxbb
1r0w_A_4301r0w   A433441LCLVGNPVLHHHTT-EEEaaaavxxab
1tib_*_421tib   -4452VEKADATFLHHHTT-EEEaaaalxbxa
1v8a_A_21v8a   A1119VRERRPLVHHHHH--EEEaaaalxxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gny_A_1571gny   A     XYPBETA-D-XYLOPYRANOSE Q - 167
1gny_A_1571gny   A     XYPBETA-D-XYLOPYRANOSE F - 169
1gny_A_1571gny   A     XYPBETA-D-XYLOPYRANOSE Q - 171
1h6f_A_1101h6f   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED K - 110
1h6f_A_1101h6f   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED E - 111
1hsk_A_1441hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 144
1hsk_A_1441hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 145
1hsk_A_1441hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 146
1hsk_A_1441hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 147
1hsk_A_1441hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 148
1hsk_A_1441hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 149
1hsk_A_1441hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 150
1hsk_A_1441hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 151
1hsk_A_1441hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 152
1hsk_A_1441hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 153
1hsk_A_1441hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 154
1i27_A_4861i27   A     ZNZINC ION I - 507
1kfw_A_1491kfw   A     GOLGLYCEROL K - 154
1kfw_A_1491kfw   A     GOLGLYCEROL Y - 163
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gny_A_1571gny   A AC3XYP BINDING SITE FOR CHAIN AQ - 171
1h6f_A_1101h6f   A MO6MO6 BINDING SITE FOR CHAIN AE - 111

Clusters included in this Subclass
CLUSTER: HE.1.19
CLUSTER: HE.2.47
CLUSTER: HE.3.36