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Information on SUBCLASS 3.1.2
Subclass Accession number: 1135
Subclass: 3.1.2 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 51904 (>75 %)  51905 (>75 %)  
 Number of loops: 27

Average sequence ID (%) : 11.2 +/- 14.6
Average RMSD (Å) : 0.548 +/- 0.294

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: hXXXpXX
(φψ)-conformation: bbaapaa
Pattern: xxx[afilpvwy][adnqrs]x[deknqstw][cdehknqrst][dekpqst]x[acfgivy]x[adeknqrst]
Conservation:-1.000-0.768-1.4600.0191.907-0.371-0.2431.0030.371-1.6390.1310.6740.375
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a26_*_7991a26   -801813IKVVDKDSEEAKIEEE--TTSHHHHHbbxxxaaxaaaaa
1b3a_A_481b3a   A4860QVCANPEKKWVREEEEE-TTSHHHHHbbxbxaaxaaaaa
1bag_*_1461bag   -146156..DWNTQNTQVQS..EE-TT-HHHHH..xpxaaxaaaaa
1bob_*_1321bob   -136148VYKSSLVDDFARREEEE-S-SHHHHHbbbbxaaxaaaaa
1cm9_A_521cm9   A5264QVCADKSKDWVKKEEEE-TTSHHHHHbbxbxaaxaaaaa
1dok_A_501dok   A5062EICADPKQKWVQDEEEE-TTSHHHHHbbxbxaaxaaaaa
1dzf_A_1771dzf   A177187..RIQRADPVALY..EE-TT-HHHHH..bbxaapaaaaa
1e43_A_1991e43   A199210.ADVDYDHPDVVA.EEE-TT-HHHHH.xxxxaaxaaaaa
1f2l_A_481f2l   A4860LFCADPKEQWVKDEEEE-TTSHHHHHbbbbxaaxaaaaa
1fvk_A_221fvk   A2335LEFFSFFCPHCYQEEEE-TT-HHHHHbbbbbaaxaaaaa
1jmj_A_2291jmj   A229241AQIADFSDPAFISEEEE-TT-HHHHHxxxbbaabaaaaa
1mla_*_2931mla   -293304.TASALNEPSAMA.EEEE--SHHHHH.bbbbaabaaaaa
1nnf_A_1331nnf   A133144.IGYVSTSGAFLE.EEE-TTSHHHHH.bxbbaaxaaaaa
1nr4_A_481nr4   A4860AICSDPNNKRVKNEEEE-TTSHHHHHbbxbxaaxaaaaa
1o80_A_511o80   A5163KRCLNPESKAIKNEEEE-TTSHHHHHxbxbxaaxaaaaa
1o94_A_751o94   A7584...ARIWDEGDVR...EE-SSHHHHH...xbaabaaaaa
1q16_B_3001q16   B300310..FLDPNDPKVIE..EE-TT-HHHHH..xbxaaxaaaaa
1qg7_A_481qg7   A4860QVCIDPKLKWIQEEEEE-TT-HHHHHbbxbxaapaaaaa
1r26_A_211r26   A2335AWFTAVWCGPCKTEEEE-TT-HHHHHxbxbbaabaaaaa
1r5a_A_31r5a   A416VLYYLPASPPCRSEEEE-TT-HHHHHxbxbbaapaaaaa
1r7a_A_1601r7a   A160172QVDIDTDSDKGWEEEEB-TTSHHHHHbxxxxaaxaaaaa
1sfe_*_591sfe   -5969..DNAPADLMFQQ..EE-TT-HHHHH..bxbaaxaaaaa
1tvx_A_651tvx   A6577KICLDPDAPRIKKEEEE-TT-HHHHHbbxbxaaxaaaaa
1uc7_A_311uc7   A3345LDLYADWCVACKEEEEE-TT-HHHHHbbbbbaaxaaaaa
1usc_A_491usc   A5163GVSISPKRFTHGLEEEE-TTSHHHHHbbbbxaaxaaaaa
1uzp_A_15751uzp   A15751587EMCPAVNTSEYKIEE---TTSHHHHHbxxxxaaxaaaaa
1v74_A_6751v74   A678690GWKINPDADNGRIEEE--TTSHHHHHbbxxbaaxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bag_*_1461bag   *     CACALCIUM ION D - 146
1bag_*_1461bag   *     CACALCIUM ION W - 147
1bag_*_1461bag   *     CACALCIUM ION T - 149
1cm9_A_521cm9   A     MSESELENOMETHIONINE K - 57
1cm9_A_521cm9   A     MSESELENOMETHIONINE W - 61
1cm9_A_521cm9   A     MSESELENOMETHIONINE V - 62
1cm9_A_521cm9   A     MSESELENOMETHIONINE K - 63
1cm9_A_521cm9   A     MSESELENOMETHIONINE K - 64
1e43_A_1991e43   A     CACALCIUM ION D - 200
1e43_A_1991e43   A     CACALCIUM ION V - 201
1e43_A_1991e43   A     CACALCIUM ION D - 202
1e43_A_1991e43   A     CACALCIUM ION Y - 203
1e43_A_1991e43   A     CACALCIUM ION D - 204
1e43_A_1991e43   A     CACALCIUM ION H - 205
1nnf_A_1331nnf   A     EDT{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID S - 139
1nnf_A_1331nnf   A     EDT{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID G - 140
1nnf_A_1331nnf   A     EDT{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID A - 141
1nnf_A_1331nnf   A     EDT{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID F - 142
1r5a_A_31r5a   A     CUCOPPER (II) ION T - 3
1r5a_A_31r5a   A     GTSGLUTATHIONE SULFONIC ACID L - 8
1r5a_A_31r5a   A     GTSGLUTATHIONE SULFONIC ACID A - 10
1r5a_A_31r5a   A     GTSGLUTATHIONE SULFONIC ACID S - 11
1r5a_A_31r5a   A     GTSGLUTATHIONE SULFONIC ACID P - 12
1r5a_A_31r5a   A     GTSGLUTATHIONE SULFONIC ACID P - 13
1r5a_A_31r5a   A     GTSGLUTATHIONE SULFONIC ACID C - 14
1r7a_A_1601r7a   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL Q - 160
1usc_A_491usc   A     FMNFLAVIN MONONUCLEOTIDE S - 53
1usc_A_491usc   A     ACTACETATE ION S - 53
1usc_A_491usc   A     FMNFLAVIN MONONUCLEOTIDE I - 54
1usc_A_491usc   A     FMNFLAVIN MONONUCLEOTIDE S - 55
1usc_A_491usc   A     ACTACETATE ION S - 55
1usc_A_491usc   A     FMNFLAVIN MONONUCLEOTIDE K - 57
1usc_A_491usc   A     FMNFLAVIN MONONUCLEOTIDE R - 58
1usc_A_491usc   A     ACTACETATE ION R - 58
1usc_A_491usc   A     FMNFLAVIN MONONUCLEOTIDE F - 59
1usc_A_491usc   A     FMNFLAVIN MONONUCLEOTIDE T - 60
1usc_A_491usc   A     FMNFLAVIN MONONUCLEOTIDE H - 61
1uzp_A_15751uzp   A     SMSAMARIUM (III) ION S - 1583
1uzp_A_15751uzp   A     SMSAMARIUM (III) ION E - 1584
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1bag_*_1461bag   * CA1CALCIUM BINDING SITE.D - 146
1fvk_A_221fvk   A CAATHE ACTIVE SITE.C - 30
1fvk_A_221fvk   A CAATHE ACTIVE SITE.P - 31
1fvk_A_221fvk   A CAATHE ACTIVE SITE.H - 32
1fvk_A_221fvk   A CAATHE ACTIVE SITE.C - 33
1usc_A_491usc   A AC1FMN BINDING SITE FOR CHAIN AS - 53
1usc_A_491usc   A AC1FMN BINDING SITE FOR CHAIN AI - 54
1usc_A_491usc   A AC1FMN BINDING SITE FOR CHAIN AR - 58
1usc_A_491usc   A AC1FMN BINDING SITE FOR CHAIN AF - 59
1usc_A_491usc   A AC1FMN BINDING SITE FOR CHAIN AT - 60
1uzp_A_15751uzp   A AC3SM BINDING SITE FOR CHAIN AE - 1584

Clusters included in this Subclass
CLUSTER: EH.3.26
CLUSTER: EH.4.134
CLUSTER: EH.4.171
CLUSTER: EH.4.43
CLUSTER: EH.5.15
CLUSTER: EH.5.214
CLUSTER: EH.6.231