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Information on SUBCLASS 4.12.2
Subclass Accession number: 1266
Subclass: 4.12.2 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 11.6 +/- 12.6
Average RMSD (Å) : 0.945 +/- 0.242

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XhXXXcXp
(φψ)-conformation: bbppapaa
Pattern: x[ilptv]x[acps]x[DEKNS]x[denrsy][adeqrt][ailmtv][aekqt][aegknqs][AILTV][acfilvy][ekqry]
Conservation:-0.2800.862-0.2610.678-1.3222.484-1.595-0.817-0.112-0.097-0.060-0.6030.996-0.1960.322
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aye_*_111aye   -1428EIVPSNEEQIKNLLQEE---SHHHHHHHHHbbbxabaaaaaaaaa
1ejd_A_3641ejd   A364378QVMATDLRASASLVLEE--SSHHHHHHHHHxbbbaxaaaaaaaaa
1gmu_A_711gmu   A7690VVRCDDPFMLAKACYEEE-S-HHHHHHHHHbbxbabaaaaaaaaa
1hl2_A_1611hl2   A165179KQTSGDLYQMEQIRREE----HHHHHHHHHxxxbaxaaaaaaaaa
1hsk_A_481hsk   A5266YITPTKNEEVQAVVKEE--SSHHHHHHHHHbbbxabaaaaaaaaa
1itz_A_5021itz   A503517MLRPADGNETAGAYKEE---SHHHHHHHHHbxbxabaaaaaaaaa
1k66_A_1171k66   A119133IVKPLEIDRLTETVQEE--SSHHHHHHHHHbxxxaxaaaaaaaaa
1k68_A_1181k68   A120134ITKSANLSQLFQIVKEE--SSHHHHHHHHHbxxxaxaaaaaaaaa
1luc_A_1701luc   A171185YVVAESASTTEWAAEEE---SHHHHHHHHHbbxxabaaaaaaaaa
1ni4_B_1431ni4   B144158VVSPWNSEDAKGLIKEE---SHHHHHHHHHbbbxaxaaaaaaaaa
1v4v_A_2321v4v   A235249YPVHLNPVVREAVFPEE--S-HHHHHHHHHbxxpapaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ejd_A_3641ejd   A     PO4PHOSPHATE ION T - 368
1ejd_A_3641ejd   A     PO4PHOSPHATE ION L - 370
1hl2_A_1611hl2   A     3PY3-HYDROXYPYRUVIC ACID K - 165
1hl2_A_1611hl2   A     3PY3-HYDROXYPYRUVIC ACID T - 167
1k68_A_1181k68   A     PHDASPARTYL PHOSPHATE K - 122
1k68_A_1181k68   A     MGMAGNESIUM ION K - 122
1luc_A_1701luc   A     EDO1,2-ETHANEDIOL E - 175
1luc_A_1701luc   A     EDO1,2-ETHANEDIOL S - 176
1luc_A_1701luc   A     EDO1,2-ETHANEDIOL S - 178
1luc_A_1701luc   A     EDO1,2-ETHANEDIOL T - 179
1luc_A_1701luc   A     EDO1,2-ETHANEDIOL W - 182
1ni4_B_1431ni4   B     MSESELENOMETHIONINE S - 146
1ni4_B_1431ni4   B     MSESELENOMETHIONINE P - 147
1ni4_B_1431ni4   B     MSESELENOMETHIONINE W - 148
1ni4_B_1431ni4   B     MSESELENOMETHIONINE N - 149
1ni4_B_1431ni4   B     MSESELENOMETHIONINE I - 157
1ni4_B_1431ni4   B     MSESELENOMETHIONINE K - 158
1ni4_B_1431ni4   B     MSESELENOMETHIONINE I - 161
1v4v_A_2321v4v   A     MSESELENOMETHIONINE Y - 235
1v4v_A_2321v4v   A     MSESELENOMETHIONINE P - 236
1v4v_A_2321v4v   A     MSESELENOMETHIONINE V - 237
1v4v_A_2321v4v   A     MSESELENOMETHIONINE H - 238
1v4v_A_2321v4v   A     MSESELENOMETHIONINE V - 243
1v4v_A_2321v4v   A     MSESELENOMETHIONINE V - 247
1v4v_A_2321v4v   A     MSESELENOMETHIONINE L - 251
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hl2_A_1611hl2   A CATCATALYTIC LYSINE FORMING SCHIFF BASEK - 165
1hl2_A_1611hl2   A AC13PY BINDING SITE FOR CHAIN AT - 167

Clusters included in this Subclass
CLUSTER: EH.3.135
CLUSTER: EH.4.65
CLUSTER: EH.5.111