ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.11.2

Subclass Accession number: 1396
Subclass: 5.11.2

Type: EH beta-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>75 %)
GO : GO:0008168 (>75 %)  GO:0008757 (>75 %)  GO:0016741 (>75 %)
SCOP : 53334 (>75 %)  53335 (>75 %)

Number of loops: 5

Average sequence ID (%) : 16.7 +/- 15.0
Average RMSD (Å) : 0.860 +/- 0.230

Consensus geometry

d (Å): 7

delta (°): 45-90

theta (°): 90-135

rho (°): 0-45

Consensus Sequence:	XhhXppphX
(φψ)-conformation:	bbpaabpaa

Pattern:	x	[AFGIV]	[ael]	[AILVY]	[mpy]	x	[DENT]	[DERS]	[DSY]	[AIPV]	[el]	[DE]	[ATV]	[AL]	[ERS]
Conservation:	-0.876	-1.033	-0.825	-0.264	-0.728	-1.275	0.713	0.323	0.029	-0.314	-0.390	2.646	0.656	0.485	0.853

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1cr1_A_337	1cr1	A	337	351	VGLAMLEESVEETAE	EEEEESSS-HHHHHH	bxbbbaaxxaaaaaa
1czp_A_14	1czp	A	17	31	EIEVPDDEYILDAAE	EEEEETTS-HHHHHH	bbbbpaabxaaaaaa
1jj2_R_62	1jj2	R	65	79	VVRLSEDDDAQEVAS	EEEE-TTS-HHHHHH	bbxxxaabbaaaaaa
1poi_B_207	1poi	B	209	223	LAAYYPTSSPEDVLE	EEEE-TT--HHHHHH	xabbxaabbaaaaaa
2pia_*_248	2pia	-	248	262	SFEIPANRSILEVLR	EEEE-TTS-HHHHHH	bbxxxaabxaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1czp_A_14	1czp	A	FESFE2/S2 (INORGANIC) CLUSTER	L - 27
2pia_*_248	2pia	*	FESFE2/S2 (INORGANIC) CLUSTER	L - 258

Clusters included in this Subclass

CLUSTER: EH.4.188

CLUSTER: EH.5.258