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Information on SUBCLASS 2.8.1
Subclass Accession number: 171
Subclass: 2.8.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.4 (>75 %)  3.4.22 (>75 %)  7 (>75 %)  
GO : GO:0004175 (>75 %)  GO:0004197 (>75 %)  GO:0004326 (>75 %)  GO:0008233 (>75 %)  GO:0008234 (>75 %)  GO:0016874 (>75 %)  GO:0016879 (>75 %)  GO:0016881 (>75 %)  
SCOP : 53243 (>75 %)  53244 (>75 %)  53250 (>75 %)  54000 (>75 %)  54001 (>75 %)  54002 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 6.0 +/- 6.6
Average RMSD (Å) : 0.725 +/- 0.222

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XpXXhX
(φψ)-conformation: aappbb
Pattern: xxxxx[FGLV][ENP]xx[PQT][ILY]xxx
Conservation:-0.1190.370-0.238-1.1930.440-1.0951.523-0.607-0.5091.6171.729-0.998-0.412-0.509
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d0q_A_191d0q   A1932IVDVIGEYVQLKRQHHHHHTTTS--EEEaaaaaaaabxbbxb
1jbw_A_3911jbw   A397410ASLNDVPDQPIVITHHHHH-TTS-EEEEaaaaaaaabxbbbb
1o5z_A_3141o5z   A323336SLKLYFNGEPLSLVHHHHH-TT--EEEEaaaaaaaaxwbbbb
1rtq_A_1991rtq   A208221LMDEYLPSLTYGFDHHHHH-TT--EEEEaaaaaaaaxbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jbw_A_3911jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER T - 410
1jbw_A_3911jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER G - 411

Clusters included in this Subclass
CLUSTER: HE.6.55