Information on SUBCLASS 4.4.3 |
Subclass Accession number: 1799
Subclass: 4.4.3 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>50 %) 3.2.1 (>50 %) GO : GO:0004553 (>50 %) GO:0008270 (>50 %) GO:0016160 (>50 %) GO:0016798 (>50 %) SCOP : 48725 (>50 %) |
Number of loops: 11 Average sequence ID (%) : 13.3 +/- 16.1 Average RMSD (Å) : 0.709 +/- 0.212 Consensus geometry
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Consensus Sequence: | XhXXXXXX |
(φψ)-conformation: | bbppgpbb |
Pattern: | [fgilmtv] | x | [ILV] | [gkqs] | [ADGPT] | [gkqs] | [degq] | x | [aklmv] | [aciklv] | [fgilvy] | x |
Conservation: | -0.304 | -1.196 | 2.661 | 0.233 | 0.484 | 0.092 | 0.488 | -0.868 | -0.300 | -0.389 | 0.030 | -0.932 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f3l_A_479 | 1f3l | A | 488 | 499 | FPVKAGEALKGK | EEE-TT-EEEEE | bwbbpvxbbxbb |
1f7d_A_26 | 1f7d | A | 26 | 37 | IHLLPGEVKVIP | EEE-TT-EEEEE | bbbxpvxbbxxx |
1fwx_A_535 | 1fwx | A | 537 | 548 | MEIGPQMTSSVT | EEE-TT-EEEEE | bxbxpvxbbbbb |
1g29_1_16 | 1g29 | 1 | 24 | 35 | LEVKDGEFMILL | EEEETT-EEEEE | bbxxpvxbxbbb |
1gjw_A_618 | 1gjw | A | 624 | 635 | VVLKPLEFALVV | EEE-TT-EEEEE | bbxxxvbbbbbb |
1jsd_A_219 | 1jsd | A | 225 | 236 | SVLKPGQTLRVR | EEE-TT-EEEEE | bbxxpgxbbbbb |
1pe9_A_272 | 1pe9 | A | 272 | 283 | FGIGTSGSVLSE | EEE-TT-EEEEE | xbxxpUxbbbbb |
1pm4_A_18 | 1pm4 | A | 23 | 34 | GTIQGKGEVCII | EEE-TT-EEEEE | bbbxpvxbbbbx |
1pmi_*_276 | 1pmi | - | 277 | 288 | MFLQAKDPHAYI | EEE-TT--EEEE | bbxxxvbxbbxa |
1vh4_A_296 | 1vh4 | A | 303 | 314 | TIVSDKGRAVFN | EEE-TT-EEEEE | bbbxpvxbbbbb |
2viu_A_229 | 2viu | A | 235 | 246 | TIVKPGDVLVIN | EEE-TT-EEEEE | bbbxpvxbxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g29_1_16 | 1g29 | 1 | POPPYROPHOSPHATE 2- | A - 18 |
1g29_1_16 | 1g29 | 1 | POPPYROPHOSPHATE 2- | V - 19 |
1pmi_*_276 | 1pmi | * | ZNZINC ION | L - 279 |
1pmi_*_276 | 1pmi | * | ZNZINC ION | H - 285 |
1pmi_*_276 | 1pmi | * | ZNZINC ION | Y - 287 |
1pmi_*_276 | 1pmi | * | ZNZINC ION | E - 294 |
2viu_A_229 | 2viu | A | NAGN-ACETYL-D-GLUCOSAMINE | V - 242 |
2viu_A_229 | 2viu | A | NAGN-ACETYL-D-GLUCOSAMINE | V - 244 |
2viu_A_229 | 2viu | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 246 |
Clusters included in this Subclass |
CLUSTER: AR.3.42 |
CLUSTER: AR.4.200 |
CLUSTER: AR.5.186 |