Information on SUBCLASS 4.23.1 |
Subclass Accession number: 1840
Subclass: 4.23.1 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.1 (>75 %) 3.1.3 (>75 %) 3.1.3.485.1 (>75 %) 5.1.3 (>75 %) 5.1.3.2 GO : GO:0003978 (>75 %) GO:0004872 (>75 %) GO:0004888 (>75 %) GO:0005001 (>75 %) GO:0016301 (>75 %) GO:0016772 (>75 %) GO:0016788 (>75 %) GO:0016791 (>75 %) GO:0016853 (>75 %) GO:0016854 (>75 %) GO:0016857 (>75 %) GO:0019198 (>75 %) GO:0042578 (>75 %) SCOP : 51734 (>75 %) 51735 (>75 %) 51751 (>75 %) 52798 (>75 %) 52799 (>75 %) 52805 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 45.0 +/- 21.2 Average RMSD (Å) : 0.150 +/- 0.058 Consensus geometry
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Consensus Sequence: | VMXppXXE |
(φψ)-conformation: | bbabpabb |
Pattern: | [GITV] | [IV] | [V] | [M] | [LMT] | [NT] | [KR] | x | x | [E] |
Conservation: | -1.293 | 0.447 | 0.719 | 1.265 | -0.558 | 0.104 | 0.447 | -1.104 | -1.293 | 1.265 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1lar_A_1419 | 1lar | A | 1419 | 1428 | TVVMMTRLEE | EEEE-S-SEE | bbbbabxabb |
1lar_A_1708 | 1lar | A | 1708 | 1717 | IIVMLTKLRE | EEEE-S-SEE | bbbbabxabb |
1pa1_A_606 | 1pa1 | A | 606 | 615 | GVVMLNRVME | EEEE-S-SEE | bbbbabbabb |
2shp_A_352 | 2shp | A | 352 | 361 | VIVMTTKEVE | EEEE-S-SEE | bbbbabxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
2shp_A_352 | 2shp | A | CATDODECANE-TRIMETHYLAMINE | V - 354 |
2shp_A_352 | 2shp | A | CATDODECANE-TRIMETHYLAMINE | T - 356 |
Clusters included in this Subclass |
CLUSTER: AR.3.122 |