Information on SUBCLASS 0.1.20 |
Subclass Accession number: 20
Subclass: 0.1.20 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 22.7 +/- 19.5 Average RMSD (Å) : 0.420 +/- 0.110 Consensus geometry
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Consensus Sequence: | pphX |
(φψ)-conformation: | aabp |
Pattern: | [GIP] | [DEHKP] | [fl] | [A] | [EKQR] | x | [afk] | x | [TV] | [ILV] | [adv] |
Conservation: | -0.733 | -0.355 | -0.309 | 2.046 | 0.643 | -0.659 | -0.405 | -1.237 | 0.697 | 1.151 | -0.839 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c4x_A_51 | 1c4x | A | 52 | 62 | PDLAENFFVVA | HHHHTTSEEEE | aaaaaabxxbb |
1ehy_A_46 | 1ehy | A | 50 | 60 | GPLAEHYDVIV | HHHHTTSEEEE | aaaaaabxxbb |
1j3v_A_18 | 1j3v | A | 18 | 28 | GHLARRFPTLV | HHHHTTS-EEE | aaaaaabwbbb |
1vhv_A_65 | 1vhv | A | 69 | 79 | IERAKSKSVVL | HHHHTTSEEEE | aaaaaabxbbb |
2dap_*_71 | 2dap | - | 77 | 87 | PKFAQFACTVD | HHHHTTSEEEE | aaaaaabxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j3v_A_18 | 1j3v | A | MSESELENOMETHIONINE | G - 18 |
1j3v_A_18 | 1j3v | A | MSESELENOMETHIONINE | H - 19 |
1j3v_A_18 | 1j3v | A | MSESELENOMETHIONINE | L - 20 |
1j3v_A_18 | 1j3v | A | MSESELENOMETHIONINE | A - 21 |
1j3v_A_18 | 1j3v | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | W - 29 |
1vhv_A_65 | 1vhv | A | MSESELENOMETHIONINE | L - 80 |
1vhv_A_65 | 1vhv | A | MSESELENOMETHIONINE | V - 81 |
Clusters included in this Subclass |
CLUSTER: HE.2.70 |
CLUSTER: HE.4.95 |