ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 19.1.1

Subclass Accession number: 201
Subclass: 19.1.1
Type: HH alpha-alpha
DB: ArchDB-KI

Number of loops: 3

Average sequence ID (%) : 28.5 +/- 0.4
Average RMSD (Å) : 1.44 +/- 0.45

Consensus geometry

d (Å): 23

delta (°): 135-180

theta (°): 45-90

rho (°): 0-45

Consensus Sequence:	ppXhhFpXpXXXphXXXXXhXTp
(φψ)-conformation:	aalablllpbpaaaapplabpaa

Pattern:	[L]	[G]	[E]	[IL]	[LV]	[R]	x	[AI]	[IL]	[MV]	[DKY]	[LM]	[AVY]	[EK]	[EQ]	x	[FIL]	[IL]	[F]	[EKR]	[GN]	[DQR]	x	x	x	[EKR]	[FL]	x	x	x	x	x	[FLM]	x	[T]	[RS]	[DY]	[LPV]	x	x	[IV]
Conservation:	1.066	2.359	1.712	0.461	0.159	1.712	-0.691	-0.446	0.463	0.248	-1.091	0.721	-0.875	0.508	0.828	-0.137	-0.228	0.461	2.359	-0.013	0.546	-0.516	-1.235	-1.091	-0.660	-0.013	0.036	-1.450	-0.947	-0.224	-1.091	-1.163	-0.156	-1.235	1.712	-0.352	-0.023	-1.019	-0.300	-1.163	0.764

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bdg_*_299	1bdg	-	302	342	LGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDV	HHHHHHHHHHHHHHTTSSGGG---SGGGSTT-S-TTHHHHH	aaaaaaaaaaaaaaavabllvxbxaaaaxxvabxaaaaaaa
1cza_N_299	1cza	N	302	342	LGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAI	HHHHHHHHHHHHHHTTSSGGG---TTTTSTTSS-HHHHHHH	aaaaaaaaaaaaaaavabllvxbbaaaaxpvabxaaaaaaa
1ig8_A_310	1ig8	A	310	350	LGEILRLALMDMYKQGFIFKNQDLSKFDKPFVMDTSYPARI	HHHHHHHHHHHHHHTTSSSTT---TTTSSTTSS-THHHHHH	aaaaaaaaaaaaaaavablpvbxaaaaxb-labxaaaaaaa

Clusters included in this Subclass