Information on SUBCLASS 16.2.1 |
Subclass Accession number: 2022
Subclass: 16.2.1 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.4 (>50 %) 3.4 (>75 %) 3.4.21 (>50 %) 3.4.21.43.4.24 (>75 %) 3.4.24 (>75 %) GO : GO:0004175 (>75 %) GO:0004175 (>75 %) GO:0004222 (>75 %) GO:0004222 (>75 %) GO:0004252 (>75 %) GO:0005509 (>75 %) GO:0008233 (>75 %) GO:0008233 (>75 %) GO:0008236 (>75 %) GO:0008237 (>75 %) GO:0008237 (>75 %) GO:0008270 (>75 %) GO:0008270 (>75 %) SCOP : 50493 (>75 %) 50494 (>75 %) 50514 (>75 %) 55485 (>75 %) 55485 (>75 %) 55486 (>75 %) 55486 (>75 %) 55528 (>75 %) 55528 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 72.5 +/- -29.4 Average RMSD (Å) : 0.300 +/- 0.100 Consensus geometry
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Consensus Sequence: | ChGhXpGGXDXCQGDSGGPh |
(φψ)-conformation: | bbebaaegbbpbpgapgppb |
Pattern: | [M] | [FI] | [C] | [AV] | [G] | [FVY] | x | [ES] | [G] | [G] | [IK] | [D] | [AS] | [C] | [Q] | [G] | [D] | [S] | [G] | [G] | [P] | [FIV] | [V] |
Conservation: | 0.166 | -0.814 | 1.837 | -1.076 | 0.584 | -1.041 | -1.784 | -0.937 | 0.584 | 0.584 | -1.563 | 0.584 | -0.870 | 1.837 | 0.166 | 0.584 | 0.584 | -0.252 | 0.584 | 0.584 | 1.001 | -1.087 | -0.252 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gdn_A_180 | 1gdn | A | 180 | 202 | MFCAGVSSGGKDSCQGDSGGPIV | EEEE--TT---B--TT-TT-EEE | bbbbebaaegbbxbxvapgxxbG |
1p57_B_180 | 1p57 | B | 180 | 202 | MFCAGYPEGGIDACQGDSGGPFV | EEEES-TT-S-B--TT-TT-EEE | bbbbebaaegbbxbpgapgxxbb |
1s83_A_180 | 1s83 | A | 180 | 202 | MICVGFLEGGKDSCQGDSGGPVV | EEEES-TTSS-B--TT-TT-EEE | bbbbebaaevbbxbpvapvxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gdn_A_180 | 1gdn | A | GOLGLYCEROL | M - 180 |
1gdn_A_180 | 1gdn | A | GOLGLYCEROL | F - 181 |
1gdn_A_180 | 1gdn | A | GOLGLYCEROL | C - 182 |
1p57_B_180 | 1p57 | B | CR42-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL} BENZENOLATE | A - 183 |
Clusters included in this Subclass |
CLUSTER: AR.15.1 |