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Information on SUBCLASS 1.1.11
Subclass Accession number: 2035
Subclass: 1.1.11 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 9.8 +/- 13.0
Average RMSD (Å) : 0.436 +/- 0.134

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 270-315
Consensus Sequence: hXpXp
(φψ)-conformation: aapaa
Pattern: xxx[afgiklv]x[DKNST][ekpqt][deqrstw]xx
Conservation:-1.037-0.949-0.387-0.565-0.3822.3550.8580.0220.289-0.206
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bn8_A_851bn8   A8897YLKAYDPSTWHHHHT-HHHHaaaaapaaaa
1cke_A_881cke   A8897SGEIRTQEVAHHHHTSHHHHaaaaaxaaaa
1enp_*_1001enp   -100109EDVKANKRYAHHHHTSHHHHaaaaaxaaaa
1fp2_A_1121fp2   A115124VECVLDPTLSHHHHT-HHHHaaaaapaaaa
1gkz_A_841gkz   A8493FIIGCNPTILHHHHTSHHHHaaaaaxaaaa
1h6h_A_1211h6h   A121130VWVLMDEDVRHHHHT-HHHHaaaaapaaaa
1j99_A_2081j99   A214223ILKNSSFQSMHHHHT-HHHHaaaaaxaaaa
1jm6_A_10651jm6   A10651074DRVLSTPSVQHHHHTSHHHHaaaaapaaaa
1mla_*_531mla   -5362AEELNKTWQTHHHHTSHHHHaaaaaxaaaa
1n9e_A_1761n9e   A187196NKNLNTTIMRHHHHTSHHHHaaaaaxaaaa
1nm2_A_501nm2   A5059ADEIRDTSVAHHHHT-HHHHaaaaapaaaa
1nt4_A_2361nt4   A249258DSLFTSPEVAHHHH-SHHHHaaaaapaaaa
1s4n_A_3331s4n   A333342LNLWRSPAYRHHHHTSHHHHaaaaaxaaaa
5csm_A_65csm   A615PETVLNLQNIHHHHS-HHHHaaaaaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fp2_A_1121fp2   A     HMO4'-HYDROXY-7-METHOXYISOFLAVONE C - 117
1fp2_A_1121fp2   A     HMO4'-HYDROXY-7-METHOXYISOFLAVONE V - 118
1fp2_A_1121fp2   A     HMO4'-HYDROXY-7-METHOXYISOFLAVONE L - 119
1fp2_A_1121fp2   A     HMO4'-HYDROXY-7-METHOXYISOFLAVONE D - 120
1fp2_A_1121fp2   A     HMO4'-HYDROXY-7-METHOXYISOFLAVONE L - 123
1fp2_A_1121fp2   A     HMO4'-HYDROXY-7-METHOXYISOFLAVONE S - 124
1fp2_A_1121fp2   A     HMO4'-HYDROXY-7-METHOXYISOFLAVONE G - 125
1gkz_A_841gkz   A     XEXENON Y - 99
1gkz_A_841gkz   A     XEXENON A - 102
1gkz_A_841gkz   A     XEXENON L - 106
1n9e_A_1761n9e   A     NAGN-ACETYL-D-GLUCOSAMINE N - 187
1n9e_A_1761n9e   A     NAGN-ACETYL-D-GLUCOSAMINE N - 191
1n9e_A_1761n9e   A     NAGN-ACETYL-D-GLUCOSAMINE R - 196
1nm2_A_501nm2   A     NINICKEL (II) ION A - 50
1nm2_A_501nm2   A     NINICKEL (II) ION D - 51
1nm2_A_501nm2   A     NINICKEL (II) ION E - 52
1nt4_A_2361nt4   A     G1PALPHA-D-GLUCOSE-1-PHOSPHATE Y - 247
1nt4_A_2361nt4   A     G1PALPHA-D-GLUCOSE-1-PHOSPHATE Q - 248
1nt4_A_2361nt4   A     G1PALPHA-D-GLUCOSE-1-PHOSPHATE L - 251
1nt4_A_2361nt4   A     G1PALPHA-D-GLUCOSE-1-PHOSPHATE F - 252
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
5csm_A_65csm   A ACTACTIVE SITE.L - 12
5csm_A_65csm   A ACTACTIVE SITE.R - 16
5csm_A_65csm   A ACTACTIVE SITE.L - 19

Clusters included in this Subclass
CLUSTER: HH.1.34
CLUSTER: HH.2.59
CLUSTER: HH.3.213