Information on SUBCLASS 1.1.11 |
Subclass Accession number: 2035
Subclass: 1.1.11 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 9.8 +/- 13.0 Average RMSD (Å) : 0.436 +/- 0.134 Consensus geometry
|
Consensus Sequence: | hXpXp |
(φψ)-conformation: | aapaa |
Pattern: | x | x | x | [afgiklv] | x | [DKNST] | [ekpqt] | [deqrstw] | x | x |
Conservation: | -1.037 | -0.949 | -0.387 | -0.565 | -0.382 | 2.355 | 0.858 | 0.022 | 0.289 | -0.206 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bn8_A_85 | 1bn8 | A | 88 | 97 | YLKAYDPSTW | HHHHT-HHHH | aaaaapaaaa |
1cke_A_88 | 1cke | A | 88 | 97 | SGEIRTQEVA | HHHHTSHHHH | aaaaaxaaaa |
1enp_*_100 | 1enp | - | 100 | 109 | EDVKANKRYA | HHHHTSHHHH | aaaaaxaaaa |
1fp2_A_112 | 1fp2 | A | 115 | 124 | VECVLDPTLS | HHHHT-HHHH | aaaaapaaaa |
1gkz_A_84 | 1gkz | A | 84 | 93 | FIIGCNPTIL | HHHHTSHHHH | aaaaaxaaaa |
1h6h_A_121 | 1h6h | A | 121 | 130 | VWVLMDEDVR | HHHHT-HHHH | aaaaapaaaa |
1j99_A_208 | 1j99 | A | 214 | 223 | ILKNSSFQSM | HHHHT-HHHH | aaaaaxaaaa |
1jm6_A_1065 | 1jm6 | A | 1065 | 1074 | DRVLSTPSVQ | HHHHTSHHHH | aaaaapaaaa |
1mla_*_53 | 1mla | - | 53 | 62 | AEELNKTWQT | HHHHTSHHHH | aaaaaxaaaa |
1n9e_A_176 | 1n9e | A | 187 | 196 | NKNLNTTIMR | HHHHTSHHHH | aaaaaxaaaa |
1nm2_A_50 | 1nm2 | A | 50 | 59 | ADEIRDTSVA | HHHHT-HHHH | aaaaapaaaa |
1nt4_A_236 | 1nt4 | A | 249 | 258 | DSLFTSPEVA | HHHH-SHHHH | aaaaapaaaa |
1s4n_A_333 | 1s4n | A | 333 | 342 | LNLWRSPAYR | HHHHTSHHHH | aaaaaxaaaa |
5csm_A_6 | 5csm | A | 6 | 15 | PETVLNLQNI | HHHHS-HHHH | aaaaaxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
5csm_A_6 | 5csm | A | ACTACTIVE SITE. | L - 12 |
5csm_A_6 | 5csm | A | ACTACTIVE SITE. | R - 16 |
5csm_A_6 | 5csm | A | ACTACTIVE SITE. | L - 19 |
Clusters included in this Subclass |
CLUSTER: HH.1.34 |
CLUSTER: HH.2.59 |
CLUSTER: HH.3.213 |