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Information on SUBCLASS 3.3.6
Subclass Accession number: 209
Subclass: 3.3.6 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 5.9 +/- 8.5
Average RMSD (Å) : 0.800 +/- 0.300

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: pXXpphX
(φψ)-conformation: aapaaba
Pattern: xx[KRY]xx[QRS][NQW]x[KNQ][RY][LV][EKM][EM][GLT]xxx
Conservation:0.022-0.7060.313-0.561-0.8520.459-0.124-1.1441.0422.0511.8940.0220.846-1.435-0.706-0.415-0.706
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dhn_*_731dhn   -8197ANRINSQYNRVMETKVRHHHHHHH-TTEEEEEEEaaaaaaabaaxabbbbb
1ln1_A_751ln1   A7591SDYRKQWDQYVKELYEQHHHHHHH-TTEEEEEEEaaaaaaaxaaxabbbbb
1nvm_B_141nvm   B2036MIKVLRNAKYLEMGAMVHHHHHHH-SSEEEEEEEaaaaaaaxaabbxabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ln1_A_751ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE R - 78
1ln1_A_751ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE D - 82
1ln1_A_751ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE Y - 84
1nvm_B_141nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 14
1nvm_B_141nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 15
1nvm_B_141nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 16
1nvm_B_141nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 36

Clusters included in this Subclass
CLUSTER: HE.3.118