Information on SUBCLASS 2.3.7 |
Subclass Accession number: 2225
Subclass: 2.3.7 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005344 (>75 %) SCOP : 46457 (>75 %) 46458 (>75 %) 46463 (>75 %) |
Number of loops: 8 Average sequence ID (%) : 9.2 +/- 10.5 Average RMSD (Å) : 0.825 +/- 0.139 Consensus geometry
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Consensus Sequence: | ppXchX |
(φψ)-conformation: | aabpaa |
Pattern: | [aegp] | x | x | [afgiy] | [adens] | x | [acgit] | [DEN] | x | x | x | x |
Conservation: | 0.028 | -0.594 | -0.314 | -0.064 | 0.419 | -0.239 | -0.288 | 2.985 | -1.006 | -0.364 | -0.371 | -0.191 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bgf_*_35 | 1bgf | - | 35 | 46 | AQWIETQDWEVA | HHHHHHS-HHHH | aaaaaaxxaaaa |
1d8c_A_538 | 1d8c | A | 545 | 556 | ALHYHQTNVQSV | HHHHHHS-HHHH | aaaaaabxaaaa |
1itx_A_256 | 1itx | A | 256 | 267 | ATYAANTELAKI | HHHHHTS-HHHH | aaaaaabbaaaa |
1jqn_A_758 | 1jqn | A | 768 | 779 | EMVFAKADLWLA | HHHHHH--HHHH | aaaaaaxbaaaa |
1ld8_B_666 | 1ld8 | B | 666 | 677 | EEAYDIINREKL | HHHHHHS-HHHH | aaaaaaxxaaaa |
1leh_A_138 | 1leh | A | 138 | 149 | PAFGSSGNPSPV | HHHHHH--HHHH | aaaaaabxaaaa |
1msw_D_821 | 1msw | D | 833 | 844 | VDTYESCDVLAD | HHHHHH--HHHH | aaaaaabxaaaa |
5csm_A_185 | 5csm | A | 187 | 198 | GIMKNITNSAVE | HHHHHT--HHHH | aaaaaabbaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d8c_A_538 | 1d8c | A | MSESELENOMETHIONINE | T - 539 |
1d8c_A_538 | 1d8c | A | MSESELENOMETHIONINE | A - 540 |
1d8c_A_538 | 1d8c | A | MSESELENOMETHIONINE | A - 541 |
1d8c_A_538 | 1d8c | A | MSESELENOMETHIONINE | L - 543 |
1d8c_A_538 | 1d8c | A | MSESELENOMETHIONINE | H - 544 |
1d8c_A_538 | 1d8c | A | MSESELENOMETHIONINE | H - 547 |
1jqn_A_758 | 1jqn | A | ASPASPARTIC ACID | M - 769 |
1jqn_A_758 | 1jqn | A | ASPASPARTIC ACID | K - 773 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
5csm_A_185 | 5csm | A | ACTACTIVE SITE. | N - 194 |
5csm_A_185 | 5csm | A | ACTACTIVE SITE. | V - 197 |
5csm_A_185 | 5csm | A | ACTACTIVE SITE. | E - 198 |
Clusters included in this Subclass |
CLUSTER: HH.2.67 |