Information on SUBCLASS 3.2.8 |
Subclass Accession number: 2282
Subclass: 3.2.8 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0003913 (>75 %) GO:0005102 (>75 %) GO:0016829 (>75 %) GO:0016830 (>75 %) SCOP : 48172 (>75 %) 48173 (>75 %) 48174 (>75 %) 56836 (>75 %) 56849 (>75 %) 56850 (>75 %) |
Number of loops: 6 Average sequence ID (%) : 17.7 +/- 26.0 Average RMSD (Å) : 0.650 +/- 0.327 Consensus geometry
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Consensus Sequence: | pXGhphp |
(φψ)-conformation: | aalppaa |
Pattern: | x | x | x | [avy] | x | [ftv] | [akl] | [CTVY] | [kmv] | [DENQT] | x | [GIL] | [afi] | [DPS] | [ivw] | [DER] | [ekrw] | [GIV] | [aefm] | [EQR] | [afiwy] | [AFIL] | [emry] |
Conservation: | -0.794 | -0.217 | -0.546 | -0.059 | -0.658 | -0.535 | -0.326 | 0.452 | -0.479 | 0.878 | -0.832 | 0.679 | -0.778 | 1.948 | -0.469 | 1.656 | -0.657 | -0.147 | -0.994 | 2.771 | -0.547 | 0.532 | -0.879 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dnp_A_341 | 1dnp | A | 345 | 367 | MITASFLVKDLLIDWREGERYFM | HHHHHHHHHTS---HHHHHHHHH | aaaaaaaaaaalxpaaaaaaaaa |
1np7_A_355 | 1np7 | A | 359 | 381 | QNVASFLCKNLGIDWRWGAEWFE | HHHHHHHHHTT-B-HHHHHHHHH | aaaaaaaaaaavxpaaaaaaaaa |
1owl_A_349 | 1owl | A | 353 | 375 | MIVASFLTKDLIIDWRRGEQFFM | HHHHHHHHHTS---THHHHHHHH | aaaaaaaaaaalbpaaaaaaaaa |
1p8c_A_60 | 1p8c | A | 63 | 85 | IRYHLVRCVQEGASDEEIFEALD | HHHHHHHHHTTS--HHHHHHHHH | aaaaaaaaaaagpbaaaaaaaaa |
1riq_A_380 | 1riq | A | 380 | 402 | GKEVFTAYDTYGFPVDLIDEIAR | HHHHHHHHHTS---HHHHHHHHH | aaaaaaaaaaavxwaaaaaaaaa |
1uok_*_386 | 1uok | - | 389 | 411 | LNMYKEKVMERGEDIEKVMQSIY | HHHHHHHHHTS---HHHHHHHHH | aaaaaaaaaaavxxaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.4.228 |
CLUSTER: HH.6.37 |