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Information on SUBCLASS 3.2.10
Subclass Accession number: 2284
Subclass: 3.2.10 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005515 (>75 %)  
 Number of loops: 6

Average sequence ID (%) : 12.9 +/- 12.7
Average RMSD (Å) : 0.783 +/- 0.349

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XpGhphp
(φψ)-conformation: aalppaa
Pattern: [aklv][aden]x[afil]x[ADGKR][dqy][GN][GILV][DEHS][AEGP][deqs]x[AILTV][lmtv][DEKT]
Conservation:-0.557-0.788-0.799-0.276-0.580-0.438-0.0643.3130.1180.583-0.043-0.261-0.9340.297-0.2170.647
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gp6_A_1651gp6   A185200KALSVGLGLEPDRLEKHHHHHHTTS-TTHHHHaaaaaaavxxaaaaaa
1j3v_A_1601j3v   A183198LLALVKQGVSAEKALEHHHHHHTT--HHHHHHaaaaaaavxxaaaaaa
1l6w_A_1321l6w   A132147VNRIDAQGGSGIQTVTHHHHHHTTS-HHHHHHaaaaaaavbbaaaaaa
1n0w_A_1681n0w   A172187LAVAERYGLSGSDVLDHHHHHHTT--HHHHHHaaaaaaavbxaaaaaa
1nvp_B_101nvp   B2641RDIFLDDGVDEQVLMEHHHHHHHT--HHHHHHaaaaaaavxpaaaaaa
1q3q_A_971q3q   A111126AEELLDQNIHPSIITKHHHHHHTT--HHHHHHaaaaaaavxxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j3v_A_1601j3v   A     MSESELENOMETHIONINE A - 160
1j3v_A_1601j3v   A     MSESELENOMETHIONINE G - 161
1j3v_A_1601j3v   A     MSESELENOMETHIONINE H - 162
1j3v_A_1601j3v   A     MSESELENOMETHIONINE V - 164
1j3v_A_1601j3v   A     MSESELENOMETHIONINE K - 165
1j3v_A_1601j3v   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 165
1j3v_A_1601j3v   A     MSESELENOMETHIONINE A - 166
1j3v_A_1601j3v   A     MSESELENOMETHIONINE N - 168
1j3v_A_1601j3v   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 169
1j3v_A_1601j3v   A     MSESELENOMETHIONINE A - 170
1j3v_A_1601j3v   A     MSESELENOMETHIONINE W - 177
1j3v_A_1601j3v   A     MSESELENOMETHIONINE V - 199
1n0w_A_1681n0w   A     EDO1,2-ETHANEDIOL R - 170
1q3q_A_971q3q   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER T - 97
1q3q_A_971q3q   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER T - 98
1q3q_A_971q3q   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER T - 99
1q3q_A_971q3q   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER A - 100

Clusters included in this Subclass
CLUSTER: HH.3.109
CLUSTER: HH.5.203