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Information on SUBCLASS 3.6.8
Subclass Accession number: 232
Subclass: 3.6.8 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 14.8 +/- 19.9
Average RMSD (Å) : 0.700 +/- 0.265

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XhchXXX
(φψ)-conformation: aagpabb
Pattern: [KL][KR]x[AFV][GN][AFP][ADS][FQ][ATV]
Conservation:-0.1821.823-1.052-0.5701.431-1.052-0.185-0.124-0.089
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1im8_A_2101im8   A217225LKNVGFSQVHHHHT-SEEaaaagpabb
1mu5_A_3191mu5   A327335KKIFNPDFAHHHH--SEEaaaalxabb
1np6_A_601np6   A6068LRKAGAAQTHHHHT-SEEaaaagxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1im8_A_2101im8   A     MSESELENOMETHIONINE I - 210
1im8_A_2101im8   A     MSESELENOMETHIONINE H - 213
1im8_A_2101im8   A     MSESELENOMETHIONINE K - 214
1im8_A_2101im8   A     MSESELENOMETHIONINE L - 217
1im8_A_2101im8   A     MSESELENOMETHIONINE V - 225

Clusters included in this Subclass
CLUSTER: HE.2.104