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Information on SUBCLASS 4.8.2
Subclass Accession number: 2387
Subclass: 4.8.2 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  2 (>75 %)  
GO : GO:0004180 (>50 %)  GO:0004246 (>75 %)  GO:0008233 (>75 %)  GO:0008237 (>75 %)  GO:0008238 (>75 %)  GO:0008241 (>75 %)  GO:0008270 (>50 %)  GO:0046914 (>50 %)  
SCOP : 55485 (>75 %)  55486 (>75 %)  55505 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 8.8 +/- 10.1
Average RMSD (Å) : 1.040 +/- 0.288

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXpphchp
(φψ)-conformation: aapbppaa
Pattern: xx[klt][ilv]xxx[HKNPT]x[DNP]x[EGNQS]xxx[aekq]
Conservation:-1.002-0.617-0.1160.443-0.841-0.5530.223-0.1041.6442.6320.1950.514-0.834-1.2640.010-0.329
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hfu_A_4701hfu   A471486ANTVDANNPPVEWAQLHHHHHH----HHHHHHaaaaaabbxxaaaaaa
1j7n_A_3731j7n   A378393KLKLDIQPYDINQRLQHHHHHTS-B-HHHHHHaaaaaaxxxbaaaaaa
1lm8_V_1821lm8   V184199LYEDLEDHPNVQKDLEHHHHHHS---HHHHHHaaaaaaxxwbaaaaaa
1s7j_A_1531s7j   A153168EETVAKITPDFSALKAHHHHHH----HHHHHHaaaaaapbxxaaaaaa
2trc_P_742trc   P7792YELIHQDKEDEGCLRKHHHHHH----HHHHHHaaaaaaxbxxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
2trc_P_742trc   P     MSESELENOMETHIONINE I - 74
2trc_P_742trc   P     MSESELENOMETHIONINE E - 76
2trc_P_742trc   P     MSESELENOMETHIONINE Y - 77
2trc_P_742trc   P     MSESELENOMETHIONINE I - 80
2trc_P_742trc   P     MSESELENOMETHIONINE Y - 93
2trc_P_742trc   P     MSESELENOMETHIONINE R - 94
2trc_P_742trc   P     MSESELENOMETHIONINE R - 95
2trc_P_742trc   P     MSESELENOMETHIONINE Q - 96

Clusters included in this Subclass
CLUSTER: HH.4.82