ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.33.1

Subclass Accession number: 2480
Subclass: 5.33.1

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>75 %)  1 (>50 %)  2 (>75 %)  4.1 (>50 %)  4.1.99 (>50 %)  4.1.99.3 7 (>50 %)
GO : GO:0003904 (>50 %)  GO:0003913 (>75 %)  GO:0004672 (>50 %)  GO:0005524 (>50 %)  GO:0016301 (>50 %)  GO:0016772 (>50 %)  GO:0016773 (>50 %)  GO:0016829 (>75 %)  GO:0016830 (>75 %)  GO:0030554 (>50 %)
SCOP : 48172 (>75 %)  48173 (>75 %)  48174 (>75 %)  56111 (>50 %)  56112 (>50 %)  88854 (>50 %)

Number of loops: 3

Average sequence ID (%) : 55.6 +/- -1.1
Average RMSD (Å) : 0.200 +/- 0.100

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 45-90

rho (°): 225-270

Consensus Sequence:	pphpTGYPh
(φψ)-conformation:	aalaalbaa

Pattern:	[EPQ]	[AV]	x	[FL]	[EQT]	[AL]	[W]	[QRT]	[EQS]	[AG]	[KQ]	[T]	[G]	[Y]	[P]	[IL]	[V]	[D]	[A]	[AN]	[M]	[R]	[EQ]	[L]	[NT]	x	[T]
Conservation:	-0.778	-0.709	-1.252	-0.390	-0.873	-0.916	3.101	-0.968	-0.731	-0.390	-0.271	0.546	0.972	1.398	1.398	-0.294	0.120	0.972	0.120	-0.974	0.546	0.546	-0.076	0.120	-0.322	-1.441	0.546

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1dnp_A_310	1dnp	A	310	336	PAHLQAWQEGKTGYPIVDAAMRQLNST	HHHHHHHHHT-SS-HHHHHHHHHHHHH	aaaaaaaaavaavbaaaaaaaaaaaaa
1np7_A_324	1np7	A	324	350	QVRFELWRSGQTGYPLVDANMRELNLT	HHHHHHHHTT-SS-HHHHHHHHHHHHH	aaaaaaaaavaavbaaaaaaaaaaaaa
1owl_A_318	1owl	A	318	344	EALFTAWTQAQTGYPIVDAAMRQLTET	HHHHHHHHTT-SS-HHHHHHHHHHHHH	aaaaaaaaalaavbaaaaaaaaaaaaa

Clusters included in this Subclass