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Information on SUBCLASS 6.6.1
Subclass Accession number: 2491
Subclass: 6.6.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7 (>75 %)  3.1 (>75 %)  3.1.1 (>75 %)  
GO : GO:0004091 (>75 %)  GO:0004857 (>75 %)  GO:0004859 (>75 %)  GO:0005509 (>75 %)  GO:0005524 (>75 %)  GO:0005543 (>75 %)  GO:0005544 (>75 %)  GO:0008289 (>75 %)  GO:0016301 (>75 %)  GO:0016772 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)  
SCOP : 47873 (>75 %)  47874 (>75 %)  47875 (>75 %)  53473 (>75 %)  53474 (>75 %)  53475 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 6.9 +/- 7.2
Average RMSD (Å) : 0.950 +/- 0.370

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: LppXXXhppp
(φψ)-conformation: aalabpbpaa
Pattern: [FLM]xxx[LY][AENQ][CDKR]xx[ADP][AFV][EPST][ADKT]xxxx
Conservation:2.230-0.840-0.753-0.6592.1340.245-0.750-0.298-1.2021.0770.4220.155-0.479-0.9310.064-0.388-0.026
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aa7_A_1211aa7   A128144MGLIYNRMGAVTTEVAFHHHHHTTSS---HHHHHaaaaaavabbbxaaaaa
1nn5_A_481nn5   A5369LSSYLQKKSDVEDHSVHHHHHHTTSS---HHHHHaaaaaavabbbpaaaaa
1omw_A_1141omw   A114130MKELLACSHPFSKSAIEHHHHHTT---S-HHHHHaaaaaalabwbxaaaaa
1pdu_A_5111pdu   A527543FYLKLEDLVPAPALIENHHHHHH-SS---HHHHHaaaaaalabxxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1nn5_A_481nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE L - 57
1nn5_A_481nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE H - 69
1nn5_A_481nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE F - 72
1nn5_A_481nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE S - 73
1nn5_A_481nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE R - 76

Clusters included in this Subclass
CLUSTER: HH.6.72