Information on SUBCLASS 6.17.1 |
Subclass Accession number: 2503
Subclass: 6.17.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.5 (>75 %) 2.5.1 (>75 %) 2.5.1.182.8 (>75 %) 2.8.4 (>75 %) 2.8.4.13 (>50 %) GO : GO:0004364 (>75 %) GO:0016151 (>75 %) GO:0016765 (>75 %) GO:0016782 (>75 %) GO:0050497 (>75 %) GO:0050524 (>75 %) SCOP : 47615 (>75 %) 47616 (>75 %) 47617 (>75 %) 54861 (>75 %) 55088 (>75 %) 55094 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 4.8 +/- 6.6 Average RMSD (Å) : 1.633 +/- 0.404 Consensus geometry
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Consensus Sequence: | hXXhhXXphX |
(φψ)-conformation: | aabaaaapaa |
Pattern: | x | [GLT] | [AST] | x | x | x | x | [LV] | [ALT] | [KLM] | [AKL] | [AMV] | x | x | [GLP] | [AIY] | x | [FKR] | [RT] | [IP] | x | [GSV] | [EFH] | [AEL] | x | [GL] | x | x |
Conservation: | -0.444 | -1.127 | 1.607 | -0.102 | 0.240 | 0.240 | -0.273 | 2.795 | 0.240 | 0.752 | -0.444 | 0.923 | -1.298 | -0.956 | -1.469 | -0.102 | -0.615 | 0.069 | 2.275 | 0.571 | -0.444 | -0.615 | 0.582 | -0.786 | -0.786 | -0.289 | 0.069 | -0.615 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i5p_A_53 | 1i5p | A | 54 | 81 | VGTVSSFLLKKVGSLIGKRILSELWGII | HHHHHHHHHHHHTSTT----HHHHHHHH | aaaaaaaaaaaaabaaaabaaaaaaaaa |
1ird_A_96 | 1ird | A | 100 | 127 | LLSHCLLVTLAAHLPAEFTPAVHASLDK | HHHHHHHHHHHHH-TTT--HHHHHHHHH | aaaaaaaaaaaaabaaaaxaaaaaaaaa |
1lw3_A_423 | 1lw3 | A | 423 | 450 | RTAQLTSLAMLMLDGYYRTIRGFEVLVE | HHHHHHHHHHHHH-GGGGSHHHHHHHHH | aaaaaaaaaaaaabaaaaxaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ird_A_96 | 1ird | A | HEMPROTOPORPHYRIN IX CONTAINING FE | N - 97 |
1ird_A_96 | 1ird | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 98 |
1ird_A_96 | 1ird | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 101 |
1ird_A_96 | 1ird | A | CMOCARBON MONOXIDE | L - 101 |
1ird_A_96 | 1ird | A | HEMPROTOPORPHYRIN IX CONTAINING FE | S - 102 |
1ird_A_96 | 1ird | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 105 |
1ird_A_96 | 1ird | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 129 |
1ird_A_96 | 1ird | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 132 |
1ird_A_96 | 1ird | A | HEMPROTOPORPHYRIN IX CONTAINING FE | S - 133 |
1ird_A_96 | 1ird | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 136 |
1lw3_A_423 | 1lw3 | A | PO4PHOSPHATE ION | R - 423 |
1lw3_A_423 | 1lw3 | A | PO4PHOSPHATE ION | T - 424 |
1lw3_A_423 | 1lw3 | A | PO4PHOSPHATE ION | A - 425 |
Clusters included in this Subclass |
CLUSTER: HH.7.87 |