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Information on SUBCLASS 0.1.3
Subclass Accession number: 2553
Subclass: 0.1.3 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 30

Average sequence ID (%) : 8.3 +/- 14.9
Average RMSD (Å) : 0.460 +/- 0.157

Consensus geometry
d (Å): 3 delta (°): 0-45 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: XXXX
(φψ)-conformation: bbaa
Pattern: x[dehknprst]xxx[afilmpvy]
Conservation:-0.9040.4740.864-0.443-1.2231.232
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8r_A_1711a8r   A178183VHYCVKEEHHHHbbaaaa
1e6u_A_2111e6u   A212217LHVDDMEEHHHHbxaaaa
1fp3_A_1761fp3   A177182ESMAVPEETHHHxxaaaa
1gkp_A_2591gkp   A263268SVIPHFEEHHHHbbaaaa
1hdo_A_1751hdo   A176181ISKHDLEEHHHHbxaaaa
1j5w_A_1831j5w   A183188VKYGDVEEHHHHbxaaaa
1k4i_A_2091k4i   A211216CTIEDMEEHHHHbbaaaa
1ks5_A_1711ks5   A174179GDINAFEETHHHebaaaa
1kzy_C_18251kzy   C18261831VSHVWVEETHHHbxaaaa
1l0b_A_16581l0b   A16601665VSYSWVEETHHHbxaaaa
1l0b_A_17771l0b   A17781783VMWDWVEETHHHbxaaaa
1mr7_A_171mr7   A1823QFIKPIEEHHHHbxaaaa
1mwm_A_1391mwm   A146151MPESIPEESHHHbxaaaa
1o63_A_601o63   A6368CGTDVLEEHHHHbxaaaa
1o6l_A_1771o6l   A183188LRKEVIEEHHHHbxaaaa
1oa3_A_1671oa3   A170175GDVKNFEETHHHbbaaaa
1obb_A_2151obb   A215220GNAYPLEE-HHHbxaaaa
1ogc_A_641ogc   A6974AAAEIKEETHHHbxaaaa
1olr_A_1721olr   A175180CDIKDFEEHHHHbbaaaa
1omz_A_2161omz   A219224FNSKYLEETHHHbxaaaa
1os8_A_2261os8   A229234TEVSTFEEHHHHxxaaaa
1q35_A_1921q35   A195200GNSYYYEETHHHbxaaaa
1qg8_A_1621qg8   A164169HRYSVLEETHHHbxaaaa
1qlt_A_3101qlt   A312317RHILLDEEHHHHxxaaaa
1qtn_A_3301qtn   A331336APIYELEEHHHHbwaaaa
1rdq_E_681rdq   E7479LDKQKVEEHHHHbxaaaa
1rkx_A_2331rkx   A233238QHVLEPEETHHHbxaaaa
1sgp_E_2231sgp   E229234QPVTEAEEHHHHxxaaaa
1t15_A_17121t15   A17141719VSYFWVEETHHHbxaaaa
1uu3_A_1071uu3   A113118LEKRHIEEHHHHbxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a8r_A_1711a8r   A     GTPGUANOSINE-5'-TRIPHOSPHATE H - 179
1a8r_A_1711a8r   A     GTPGUANOSINE-5'-TRIPHOSPHATE C - 181
1a8r_A_1711a8r   A     GTPGUANOSINE-5'-TRIPHOSPHATE V - 182
1e6u_A_2111e6u   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 217
1hdo_A_1751hdo   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 178
1hdo_A_1751hdo   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 181
1k4i_A_2091k4i   A     SULSULFATE ANION I - 213
1mwm_A_1391mwm   A     MGMAGNESIUM ION E - 148
1mwm_A_1391mwm   A     ADPADENOSINE-5'-DIPHOSPHATE E - 148
1o63_A_601o63   A     MSESELENOMETHIONINE D - 66
1o6l_A_1771o6l   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER A - 179
1o6l_A_1771o6l   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER K - 181
1o6l_A_1771o6l   A     MNMANGANESE (II) ION K - 181
1o6l_A_1771o6l   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER L - 183
1omz_A_2161omz   A     UD2URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE A - 216
1os8_A_2261os8   A     CACALCIUM ION E - 230
1q35_A_1921q35   A     FMTFORMIC ACID N - 196
1q35_A_1921q35   A     FMTFORMIC ACID Y - 198
1q35_A_1921q35   A     FMTFORMIC ACID Y - 199
1qtn_A_3301qtn   A     DTDDITHIANE DIOL Y - 334
1qtn_A_3301qtn   A     DTDDITHIANE DIOL T - 337
1rdq_E_681rdq   E     ADPADENOSINE-5'-DIPHOSPHATE A - 70
1rdq_E_681rdq   E     ATPADENOSINE-5'-TRIPHOSPHATE A - 70
1rdq_E_681rdq   E     PO4PHOSPHATE ION K - 72
1rdq_E_681rdq   E     MGMAGNESIUM ION K - 72
1rdq_E_681rdq   E     ADPADENOSINE-5'-DIPHOSPHATE K - 72
1rdq_E_681rdq   E     ATPADENOSINE-5'-TRIPHOSPHATE K - 72
1rdq_E_681rdq   E     ADPADENOSINE-5'-DIPHOSPHATE L - 74
1rdq_E_681rdq   E     ATPADENOSINE-5'-TRIPHOSPHATE L - 74
1rkx_A_2331rkx   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 242
1uu3_A_1071uu3   A     GOLGLYCEROL E - 107
1uu3_A_1071uu3   A     GOLGLYCEROL Y - 108
1uu3_A_1071uu3   A     GOLGLYCEROL A - 109
1uu3_A_1071uu3   A     LY4(9R)-9-[(DIMETHYLAMINO)METHYL]-6,7,10,11-TETRAHYDRO-9H,18H-5,21:12,17-DIMETHENODIBENZO[E,K]PYRROLO[3,4-H] [1,4,13]OXADIAZACYCLOHEXADECINE-18,20-DIONE A - 109
1uu3_A_1071uu3   A     GOLGLYCEROL K - 111
1uu3_A_1071uu3   A     LY4(9R)-9-[(DIMETHYLAMINO)METHYL]-6,7,10,11-TETRAHYDRO-9H,18H-5,21:12,17-DIMETHENODIBENZO[E,K]PYRROLO[3,4-H] [1,4,13]OXADIAZACYCLOHEXADECINE-18,20-DIONE K - 111
1uu3_A_1071uu3   A     GOLGLYCEROL I - 112
1uu3_A_1071uu3   A     GOLGLYCEROL L - 113
1uu3_A_1071uu3   A     GOLGLYCEROL I - 118
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o6l_A_1771o6l   A AC1ANP BINDING SITE FOR CHAIN AA - 179
1o6l_A_1771o6l   A AC1ANP BINDING SITE FOR CHAIN AK - 181
1uu3_A_1071uu3   A AC1LY4 BINDING SITE FOR CHAIN AA - 109
1uu3_A_1071uu3   A AC1LY4 BINDING SITE FOR CHAIN AK - 111

Clusters included in this Subclass
CLUSTER: EH.0.24
CLUSTER: EH.0.25
CLUSTER: EH.1.31
CLUSTER: EH.2.62