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Information on SUBCLASS 2.4.1
Subclass Accession number: 2824
Subclass: 2.4.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 16

Average sequence ID (%) : 10.9 +/- 14.5
Average RMSD (Å) : 0.581 +/- 0.194

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXXpXX
(φψ)-conformation: bbpbaa
Pattern: xx[ailvy]x[adgnstv][denqsty][adegkqrst]xx[ikl]
Conservation:0.552-1.0271.565-0.237-0.8430.769-0.242-1.284-0.5851.334
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1di6_A_401di6   A4554RLIPDEQAIIEEEES-HHHHbbbxxbaaaa
1efv_A_1071efv   A108117ICAGASAFGKEEEESSHHHHbbbxxbaaaa
1ez0_A_2941ez0   A295304VFALNTPETQEEEESSHHHHbbbxxbaaaa
1ihu_A_1991ihu   A203212LVARLQKSTLEEEES-HHHHxbbbxbaaaa
1jet_A_3601jet   A363372LLYNTSDLHKEEEES-HHHHbxbxpbaaaa
1kaf_A_1891kaf   A192201LDIKRSAENIEEEE--HHHHbbbxxbaaaa
1l6w_A_831l6w   A8493VKVPVTAEGLEEEE-SHHHHxxbxxbaaaa
1mkz_A_431mkz   A4857AIVKENRYAIEEE-S-HHHHbbbxxbaaaa
1nd6_A_701nd6   A7281IRSTDVDRTLEEEES-HHHHbbbxxbaaaa
1o97_D_901o97   D91100VLLPHSVDSLEEEE-SHHHHbbbxxbaaaa
1oi2_A_1091oi2   A111120LIIKNYTGDIEEEESSHHHHbxbxxbaaaa
1q7z_A_4091q7z   A411420NSAKVDEEELEEEES-HHHHxMbxxbaaaa
1qfx_A_1471qfx   A149158FFSSGYGRVIEEEESBHHHHbbbxxbaaaa
1say_A_2151say   A215224ELLYSNSAEIEEEE--HHHHxbbxxbaaaa
1sei_A_231sei   A2433LEVPASKIKREEEE--HHHHbbbpxbaaaa
1un8_A_1041un8   A106115LIVKNYTGDREEEES-HHHHxbbxxbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ihu_A_1991ihu   A     ADPADENOSINE-5'-DIPHOSPHATE R - 206
1ihu_A_1991ihu   A     TASTRIHYDROXYARSENITE(III) R - 206
1ihu_A_1991ihu   A     ADPADENOSINE-5'-DIPHOSPHATE Q - 208
1ihu_A_1991ihu   A     ADPADENOSINE-5'-DIPHOSPHATE K - 209
1ihu_A_1991ihu   A     ADPADENOSINE-5'-DIPHOSPHATE S - 210
1ihu_A_1991ihu   A     AF3ALUMINUM FLUORIDE S - 210
1ihu_A_1991ihu   A     AF3ALUMINUM FLUORIDE E - 214
1jet_A_3601jet   A     IUMURANYL (VI) ION T - 360
1jet_A_3601jet   A     IUMURANYL (VI) ION F - 361
1jet_A_3601jet   A     IUMURANYL (VI) ION D - 362
1jet_A_3601jet   A     IUMURANYL (VI) ION D - 369
1jet_A_3601jet   A     IUMURANYL (VI) ION K - 373
1l6w_A_831l6w   A     GOLGLYCEROL K - 85
1nd6_A_701nd6   A     PO4PHOSPHATE ION R - 79
1o97_D_901o97   D     FADFLAVIN-ADENINE DINUCLEOTIDE V - 97
1o97_D_901o97   D     FADFLAVIN-ADENINE DINUCLEOTIDE L - 100
1oi2_A_1091oi2   A     GOLGLYCEROL K - 114
1oi2_A_1091oi2   A     GOLGLYCEROL Y - 116
1oi2_A_1091oi2   A     GOLGLYCEROL T - 117
1oi2_A_1091oi2   A     GOLGLYCEROL G - 118
1oi2_A_1091oi2   A     GOLGLYCEROL D - 119
1qfx_A_1471qfx   A     NAGN-ACETYL-D-GLUCOSAMINE F - 150
1qfx_A_1471qfx   A     GOLGLYCEROL Y - 154
1qfx_A_1471qfx   A     GOLGLYCEROL R - 156
1qfx_A_1471qfx   A     GOLGLYCEROL E - 159
1qfx_A_1471qfx   A     GOLGLYCEROL R - 162
1qfx_A_1471qfx   A     GOLGLYCEROL K - 163
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oi2_A_1091oi2   A AC1GOL BINDING SITE FOR CHAIN AK - 114
1oi2_A_1091oi2   A AC1GOL BINDING SITE FOR CHAIN AY - 116
1oi2_A_1091oi2   A AC1GOL BINDING SITE FOR CHAIN AD - 119

Clusters included in this Subclass
CLUSTER: EH.1.58
CLUSTER: EH.2.89
CLUSTER: EH.3.60