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Information on SUBCLASS 3.3.4
Subclass Accession number: 2906
Subclass: 3.3.4 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 15.9 +/- 24.7
Average RMSD (Å) : 0.829 +/- 0.293

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hXhpphX
(φψ)-conformation: bbpabaa
Pattern: xxxxxxxxxxxx
Conservation:1.308-0.796-0.931-0.9610.215-0.5990.0520.9341.3721.344-0.877-1.062
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1j97_A_1621j97   A164175AVGDGANDISMFEEESSGGGHHHHbbbabaaaaaaa
1kjq_A_1661kjq   A166177TFIRSAEQLAQAEEE-SGGGHHHHbxxabaaaaaaa
1l6r_A_1691l6r   A171182VIGDSNNDMPMFEE--SGGGHHHHbbbNbaaaaaaa
1pox_A_1361pox   A138149VTAVNAATLPHVEE---STTHHHHbxxabaaaaaaa
1pvd_A_1351pvd   A137148AMITDIATAPAEEE---TTTHHHHbbxabaaaaaaa
1qpb_A_1351qpb   A137148AMITDIATAPAEEE---GGGHHHHbbxabaaaaaaa
1upa_A_1351upa   A137148VELQRPHEITDLEE--SGGGHHHHbbxabaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j97_A_1621j97   A     BFDASPARTATE BERYLLIUM TRIFLUORIDE V - 165
1j97_A_1621j97   A     BFDASPARTATE BERYLLIUM TRIFLUORIDE G - 166
1j97_A_1621j97   A     MGMAGNESIUM ION G - 166
1j97_A_1621j97   A     BFDASPARTATE BERYLLIUM TRIFLUORIDE D - 167
1j97_A_1621j97   A     MGMAGNESIUM ION D - 167
1j97_A_1621j97   A     BFDASPARTATE BERYLLIUM TRIFLUORIDE G - 168
1j97_A_1621j97   A     MGMAGNESIUM ION G - 168
1j97_A_1621j97   A     BFDASPARTATE BERYLLIUM TRIFLUORIDE N - 170
1j97_A_1621j97   A     MGMAGNESIUM ION N - 170
1j97_A_1621j97   A     BFDASPARTATE BERYLLIUM TRIFLUORIDE D - 171
1j97_A_1621j97   A     MGMAGNESIUM ION D - 171
1j97_A_1621j97   A     BFDASPARTATE BERYLLIUM TRIFLUORIDE M - 174
1kjq_A_1661kjq   A     ADPADENOSINE-5'-DIPHOSPHATE F - 167
1l6r_A_1691l6r   A     CACALCIUM ION G - 173
1l6r_A_1691l6r   A     CACALCIUM ION D - 174
1l6r_A_1691l6r   A     CACALCIUM ION S - 175
1l6r_A_1691l6r   A     CACALCIUM ION N - 176
1l6r_A_1691l6r   A     CACALCIUM ION N - 177
1l6r_A_1691l6r   A     CACALCIUM ION D - 178
1qpb_A_1351qpb   A     PYMPYRUVAMIDE Y - 157
1qpb_A_1351qpb   A     PYMPYRUVAMIDE V - 158
1qpb_A_1351qpb   A     PYMPYRUVAMIDE T - 159
1upa_A_1351upa   A     MSESELENOMETHIONINE A - 152
1upa_A_1351upa   A     MSESELENOMETHIONINE V - 153
1upa_A_1351upa   A     MSESELENOMETHIONINE N - 154
1upa_A_1351upa   A     MSESELENOMETHIONINE A - 155

Clusters included in this Subclass
CLUSTER: EH.5.99